Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 6
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G413000.1 | Wheat | endoplasmic reticulum | 97.6 | 99.19 |
| TraesCS3D01G407700.1 | Wheat | endoplasmic reticulum | 97.6 | 97.6 |
| TraesCS3B01G447500.1 | Wheat | extracellular, vacuole | 94.93 | 95.96 |
| HORVU3Hr1G091920.2 | Barley | endoplasmic reticulum | 92.27 | 92.76 |
| HORVU3Hr1G091790.1 | Barley | extracellular | 92.0 | 92.49 |
| TraesCS3A01G412900.1 | Wheat | endoplasmic reticulum | 90.4 | 89.92 |
| Os01t0907600-01 | Rice | extracellular | 72.27 | 73.05 |
| EES01927 | Sorghum | extracellular | 68.8 | 69.92 |
| Zm00001d042446_P001 | Maize | extracellular | 68.53 | 69.84 |
| Zm00001d012120_P001 | Maize | endoplasmic reticulum | 69.87 | 69.13 |
| EER90747 | Sorghum | endoplasmic reticulum | 68.27 | 67.19 |
| TraesCS2A01G054600.1 | Wheat | cytosol, nucleus, plastid | 15.73 | 62.11 |
| TraesCS2A01G054500.1 | Wheat | cytosol, nucleus, plastid | 15.73 | 62.11 |
| TraesCS2A01G054800.1 | Wheat | cytosol, mitochondrion, nucleus | 23.73 | 60.14 |
| TraesCS4A01G273900.1 | Wheat | cytosol, nucleus, plastid | 14.93 | 58.95 |
| TraesCS6A01G346400.1 | Wheat | cytosol | 14.93 | 58.95 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 55.73 | 58.22 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 53.33 | 56.18 |
| VIT_17s0000g09770.t01 | Wine grape | endoplasmic reticulum | 53.6 | 55.83 |
| KRH63669 | Soybean | endoplasmic reticulum | 53.87 | 55.8 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 52.8 | 55.31 |
| TraesCS3A01G348500.1 | Wheat | endoplasmic reticulum | 53.6 | 55.22 |
| TraesCS3A01G346900.1 | Wheat | endoplasmic reticulum | 53.6 | 55.22 |
| PGSC0003DMT400027975 | Potato | endoplasmic reticulum | 52.53 | 55.18 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 53.07 | 55.12 |
| CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 43.2 | 55.1 |
| PGSC0003DMT400039210 | Potato | endoplasmic reticulum | 52.8 | 55.0 |
| KRH54277 | Soybean | endoplasmic reticulum | 53.07 | 54.97 |
| VIT_01s0137g00330.t01 | Wine grape | endoplasmic reticulum | 52.53 | 54.87 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 52.53 | 54.72 |
| KRH03891 | Soybean | endoplasmic reticulum | 54.13 | 53.56 |
| CDY34045 | Canola | endoplasmic reticulum | 51.47 | 53.46 |
| Bra000615.1-P | Field mustard | endoplasmic reticulum | 51.47 | 53.46 |
| TraesCS6A01G345600.1 | Wheat | cytosol, mitochondrion, nucleus | 21.07 | 53.38 |
| CDX83168 | Canola | endoplasmic reticulum | 51.2 | 53.19 |
| TraesCS4A01G238600.1 | Wheat | nucleus | 51.47 | 53.02 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 50.13 | 52.08 |
| Bra018067.1-P | Field mustard | endoplasmic reticulum | 49.33 | 51.53 |
| CDY48168 | Canola | endoplasmic reticulum | 49.33 | 51.53 |
| TraesCS6A01G154300.1 | Wheat | extracellular | 45.87 | 50.29 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 45.87 | 49.0 |
| TraesCS2A01G056000.1 | Wheat | endoplasmic reticulum, extracellular | 43.47 | 48.66 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 47.2 | 48.63 |
| TraesCS5A01G391500.1 | Wheat | endoplasmic reticulum, extracellular | 44.53 | 48.27 |
| TraesCS6A01G346800.1 | Wheat | extracellular | 43.2 | 47.79 |
| TraesCS4A01G274100.1 | Wheat | extracellular | 42.67 | 47.62 |
| TraesCS4A01G274000.1 | Wheat | extracellular | 43.2 | 47.51 |
| CDY39575 | Canola | endoplasmic reticulum | 46.4 | 47.28 |
| TraesCS1A01G223500.1 | Wheat | extracellular | 42.67 | 47.2 |
| Bra018066.1-P | Field mustard | endoplasmic reticulum | 46.13 | 47.01 |
| TraesCS4A01G273800.1 | Wheat | extracellular | 42.67 | 46.92 |
| TraesCS6A01G346600.1 | Wheat | extracellular | 42.13 | 46.61 |
| TraesCS6A01G345900.1 | Wheat | extracellular | 41.87 | 46.31 |
| TraesCS6A01G346500.1 | Wheat | extracellular | 34.4 | 45.91 |
| TraesCS5A01G138700.1 | Wheat | plastid | 46.13 | 45.89 |
| TraesCS4A01G273700.1 | Wheat | extracellular | 34.67 | 42.9 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 40.8 | 42.5 |
| TraesCS2A01G512100.1 | Wheat | extracellular | 45.6 | 37.09 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 45.07 | 36.11 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 45.07 | 36.03 |
| TraesCS2A01G545700.1 | Wheat | unclear | 45.07 | 35.81 |
| TraesCS2A01G054700.1 | Wheat | cytosol, mitochondrion, nucleus | 10.13 | 35.51 |
| TraesCS1A01G325400.1 | Wheat | extracellular | 41.07 | 34.0 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 42.67 | 33.76 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | PFAM:PF00112 | PFAM:PF08246 |
| PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF346 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS3A01G413200 | EnsemblPlants:TraesCS3A01G413200.1 | TIGR:cd02248 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3A:+:656423924..656425051
Molecular Weight (calculated)
40432.4 Da
IEP (calculated)
6.184
GRAVY (calculated)
-0.306
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQLSKNLLV ASMVAAVLAV AAVELCGAIP LEDKDLESEE ALWDLYERWQ TAHRVPRHHA EKHRRFGTFK SNAHFVHSHN KRGDRPYRLR LNRFGDMSQA
101: EFRATFVGDF RRDTLATPPS VPGFMYAAVN VSDLPPSVDW RQKGAVTGVK DQGKCGSCWA FSTVVSVEGI NAIRTGSLVS LSEQELIDCD TADNEGCQGG
201: LMDNAFEYIK SNGGLITEAA YPYRAAQGTC NVARAAQNSP VVVHIDGHQD VPANSEEALA QAVANQPVSV AVEASGKAFM FYSEGVFTGS CGTELDHGVA
301: VVGYGVAEDG KAYWTVKNSW GPSWGEQGYI RVEKDSGVAG GLCGIAMEAS YPVKTDSKPK PTPTPRRALG ARESQ
101: EFRATFVGDF RRDTLATPPS VPGFMYAAVN VSDLPPSVDW RQKGAVTGVK DQGKCGSCWA FSTVVSVEGI NAIRTGSLVS LSEQELIDCD TADNEGCQGG
201: LMDNAFEYIK SNGGLITEAA YPYRAAQGTC NVARAAQNSP VVVHIDGHQD VPANSEEALA QAVANQPVSV AVEASGKAFM FYSEGVFTGS CGTELDHGVA
301: VVGYGVAEDG KAYWTVKNSW GPSWGEQGYI RVEKDSGVAG GLCGIAMEAS YPVKTDSKPK PTPTPRRALG ARESQ
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.