Factsheet for HORVU3Hr1G091920.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
golgi 3
plasma membrane 3
endoplasmic reticulum 5
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

endoplasmic reticulum: 19759340
golgi: 19759340

gfp PMID: 19759340 doi

M Martinez, I Cambra, L Carrillo, M Diaz-Mendoza, I Diaz

Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid, Campus Montegancedo Universidad Politécnica de Madrid, 28223-Pozuelo de Alarcón, Madrid, Spain.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G091790.1	Barley	extracellular	98.66	98.66
TraesCS3D01G407700.1	Wheat	endoplasmic reticulum	93.3	92.8
TraesCS3A01G413000.1	Wheat	endoplasmic reticulum	91.42	92.41
TraesCS3A01G413200.1	Wheat	endoplasmic reticulum	92.76	92.27
TraesCS3B01G447500.1	Wheat	extracellular, vacuole	91.69	92.18
HORVU3Hr1G091800.1	Barley	endoplasmic reticulum	88.47	87.07
Os01t0907600-01	Rice	extracellular	71.31	71.7
EES01927	Sorghum	extracellular	68.36	69.11
Zm00001d042446_P001	Maize	extracellular	67.56	68.48
Zm00001d012120_P001	Maize	endoplasmic reticulum	68.63	67.55
EER90747	Sorghum	endoplasmic reticulum	67.56	66.14
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	56.84	59.05
GSMUA_Achr10P...	Banana	endoplasmic reticulum	54.16	56.74
AT5G50260.1	Thale cress	endoplasmic reticulum	54.42	56.23
KRH63669	Soybean	endoplasmic reticulum	54.16	55.8
CDY39574	Canola	cytosol, endoplasmic reticulum, nucleus	43.97	55.78
VIT_17s0000g09770.t01	Wine grape	endoplasmic reticulum	53.62	55.56
PGSC0003DMT400039210	Potato	endoplasmic reticulum	53.62	55.56
Solyc05g013920.2.1	Tomato	endoplasmic reticulum	53.08	55.31
Solyc03g111730.2.1	Tomato	endoplasmic reticulum	53.35	55.28
PGSC0003DMT400027975	Potato	endoplasmic reticulum	52.81	55.18
VIT_01s0137g00330.t01	Wine grape	endoplasmic reticulum	53.08	55.15
KRH54277	Soybean	endoplasmic reticulum	53.35	54.97
CDY34045	Canola	endoplasmic reticulum	53.08	54.85
Bra000615.1-P	Field mustard	endoplasmic reticulum	53.08	54.85
HORVU3Hr1G088270.2	Barley	extracellular	54.16	54.74
CDX83168	Canola	endoplasmic reticulum	52.81	54.57
HORVU3Hr1G088080.2	Barley	endoplasmic reticulum, extracellular	53.62	53.48
KRH03891	Soybean	endoplasmic reticulum	54.16	53.3
Bra018067.1-P	Field mustard	endoplasmic reticulum	50.67	52.65
CDY48168	Canola	endoplasmic reticulum	50.67	52.65
AT3G48340.1	Thale cress	endoplasmic reticulum, extracellular	50.67	52.35
AT3G48350.1	Thale cress	endoplasmic reticulum	48.26	49.45
HORVU4Hr1G006270.1	Barley	extracellular, vacuole	44.77	48.83
HORVU2Hr1G009150.1	Barley	extracellular, vacuole	44.5	48.68
HORVU4Hr1G006310.1	Barley	endoplasmic reticulum, extracellular	44.77	48.41
HORVU4Hr1G006280.2	Barley	extracellular	44.24	48.1
HORVU2Hr1G009610.1	Barley	extracellular	43.7	47.94
CDY39575	Canola	endoplasmic reticulum	46.92	47.55
HORVU1Hr1G060040.1	Barley	endoplasmic reticulum, extracellular	43.43	47.51
HORVU2Hr1G009640.1	Barley	extracellular	43.16	47.35
Bra018066.1-P	Field mustard	endoplasmic reticulum	46.65	47.28
HORVU6Hr1G084520.5	Barley	extracellular	42.63	46.9
HORVU6Hr1G083420.1	Barley	extracellular	42.63	46.63
HORVU5Hr1G095580.1	Barley	endoplasmic reticulum, extracellular	43.43	46.42
HORVU2Hr1G009510.1	Barley	cytosol	42.36	46.06
HORVU7Hr1G044230.3	Barley	extracellular	41.55	45.59
HORVU2Hr1G023980.2	Barley	vacuole	38.87	42.4
HORVU6Hr1G070320.2	Barley	endoplasmic reticulum, extracellular	40.48	41.48
HORVU1Hr1G003940.6	Barley	endoplasmic reticulum	39.14	39.57
HORVU2Hr1G113460.2	Barley	plasma membrane	47.72	36.4
HORVU7Hr1G055310.1	Barley	extracellular	43.16	34.48
HORVU2Hr1G121150.1	Barley	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	44.77	34.36
HORVU2Hr1G121440.2	Barley	endoplasmic reticulum	42.63	31.8
HORVU1Hr1G075530.3	Barley	plastid	39.68	29.19

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G091920	EnsemblPlants:HORVU3Hr1G091920.2
PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640
PANTHER:PTHR12411	PANTHER:PTHR12411:SF346	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001
SignalP:SignalP-noTM	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:636653126..636668405

Molecular Weight (calculated)

40543.6 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.354

Length

373 amino acids

Sequence
(BLAST)

001: MGLLSKKLLV ASMVAAVLAV AAVELCSAIP MEDKDLESEE ALWDLYERWQ SAHRVRRHHA EKHRRFGTFK SNAHFIHSHN KRGEHPYRLH LNRFGDMDQA
101: EFRATFVGDL RRDTPSKPPS VPGFMYAALN VSDLPPSVDW RQKGAVTGVK DQGKCGSCWA FSTVVSVEGI NAIRTGSLVS LSEQELIDCD TADNDGCQGG
201: LMDNAFEYIK NNGGLITEAA YPYRAARGTC NVARAAQNSP VVVHIDGHQD VPANSEEDLA RAVANQPVSV AVEASGKAFM FYSEGVFTGE CGTELDHGVA
301: VVGYGVSEDG KAYWTVKNSW GPSWGEQGYI RVEKDSGASG GLCGIAMEAS YPVKTYSKPK PTPRRALGAR ESL

Best Arabidopsis Sequence Match ( AT1G20850.1 )
(BLAST)

001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK

Arabidopsis Description

XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.