Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 5
  • golgi 3
  • plasma membrane 3
  • endoplasmic reticulum 3
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G379900.1 Wheat cytosol, mitochondrion, nucleus 43.66 100.0
TraesCS6A01G346400.1 Wheat cytosol 27.73 98.95
TraesCS6D01G329500.1 Wheat extracellular 94.99 94.99
TraesCS6D01G329600.1 Wheat extracellular 94.69 94.69
TraesCS6D01G329400.1 Wheat extracellular 90.56 93.88
TraesCS6A01G346500.1 Wheat extracellular 77.58 93.59
TraesCS6A01G346600.1 Wheat extracellular 93.22 93.22
TraesCS6B01G380200.1 Wheat extracellular 93.22 93.22
TraesCS6B01G380000.1 Wheat extracellular 92.33 92.33
HORVU6Hr1G083420.1 Barley extracellular 91.45 90.91
Zm00001d037301_P001 Maize mitochondrion 55.16 88.21
KXG19778 Sorghum cytosol, nucleus, plastid 76.99 84.74
HORVU7Hr1G044230.3 Barley extracellular 83.48 83.24
EER89590 Sorghum extracellular 83.19 82.94
Os04t0206300-00 Rice extracellular 82.89 82.89
KXG19777 Sorghum extracellular 82.89 82.65
HORVU2Hr1G009150.1 Barley extracellular, vacuole 82.89 82.4
HORVU1Hr1G060040.1 Barley endoplasmic reticulum, extracellular 82.6 82.11
EES10550 Sorghum extracellular 82.3 82.06
KXG19775 Sorghum extracellular 82.3 82.06
HORVU2Hr1G009640.1 Barley extracellular 81.71 81.47
Zm00001d037303_P001 Maize extracellular 81.71 81.47
Zm00001d045711_P001 Maize extracellular 81.42 81.18
Zm00001d045713_P001 Maize extracellular 81.42 81.18
HORVU2Hr1G009610.1 Barley extracellular 81.12 80.88
Zm00001d045709_P001 Maize extracellular 74.34 80.25
HORVU2Hr1G009510.1 Barley cytosol 79.06 78.13
HORVU4Hr1G006310.1 Barley endoplasmic reticulum, extracellular 79.35 77.97
HORVU4Hr1G006280.2 Barley extracellular 77.58 76.68
Zm00001d045708_P001 Maize extracellular 74.34 76.6
HORVU4Hr1G006270.1 Barley extracellular, vacuole 76.4 75.73
HORVU2Hr1G023980.2 Barley vacuole 66.37 65.79
Solyc02g076970.1.1 Tomato extracellular 53.1 64.06
VIT_12s0028g02250.t01 Wine grape cytosol 54.28 61.95
Solyc12g056010.1.1 Tomato endoplasmic reticulum 61.95 61.76
VIT_10s0003g01100.t01 Wine grape extracellular 61.65 61.47
PGSC0003DMT400026457 Potato extracellular 56.93 61.47
PGSC0003DMT400086163 Potato cytosol 42.18 61.37
Solyc12g056000.1.1 Tomato endoplasmic reticulum 61.36 61.18
PGSC0003DMT400012877 Potato endoplasmic reticulum, extracellular, vacuole 61.06 60.88
PGSC0003DMT400012881 Potato endoplasmic reticulum 61.06 60.88
PGSC0003DMT400026461 Potato extracellular 60.77 60.59
KRH55800 Soybean endoplasmic reticulum, golgi 61.06 60.35
PGSC0003DMT400012885 Potato extracellular 54.87 60.19
Solyc12g056020.1.1 Tomato extracellular 60.47 60.12
KRG88601 Soybean endoplasmic reticulum, golgi 60.77 60.06
KRH25765 Soybean endoplasmic reticulum, golgi 60.77 60.06
KRH55771 Soybean cytosol, nucleus 49.26 59.64
KRH25729 Soybean endoplasmic reticulum, golgi 60.18 59.48
KRG88605 Soybean endoplasmic reticulum, golgi 60.18 59.48
KRH25728 Soybean extracellular 59.88 59.18
KRH55801 Soybean golgi, vacuole 59.59 58.89
KRH25766 Soybean extracellular 59.59 58.89
VIT_12s0028g02290.t01 Wine grape endoplasmic reticulum, extracellular 59.0 58.65
KRH55750 Soybean extracellular 59.29 58.6
KRH55761 Soybean extracellular 59.29 58.6
KRH25039 Soybean extracellular, golgi, vacuole 53.98 58.47
VIT_12s0028g02300.t01 Wine grape endoplasmic reticulum, extracellular 58.7 58.36
VIT_12s0028g02270.t01 Wine grape endoplasmic reticulum, extracellular 58.7 58.36
VIT_12s0028g02260.t01 Wine grape endoplasmic reticulum, extracellular 54.28 57.14
KRH29892 Soybean extracellular, golgi, vacuole 57.52 56.85
KRH55752 Soybean endoplasmic reticulum 57.23 56.56
KRH55762 Soybean endoplasmic reticulum 56.93 56.27
Solyc03g006200.1.1 Tomato endoplasmic reticulum, extracellular 50.44 56.25
KRH13244 Soybean extracellular 54.28 55.42
KRH55769 Soybean extracellular, vacuole 56.93 54.83
KRH25038 Soybean extracellular 54.57 53.94
HORVU5Hr1G095580.1 Barley endoplasmic reticulum, extracellular 53.98 52.44
HORVU3Hr1G091800.1 Barley endoplasmic reticulum 48.97 43.8
HORVU3Hr1G088270.2 Barley extracellular 47.2 43.36
HORVU3Hr1G088080.2 Barley endoplasmic reticulum, extracellular 47.2 42.78
HORVU3Hr1G091790.1 Barley extracellular 46.9 42.63
HORVU3Hr1G091920.2 Barley endoplasmic reticulum 46.9 42.63
HORVU6Hr1G070320.2 Barley endoplasmic reticulum, extracellular 43.07 40.11
HORVU1Hr1G003940.6 Barley endoplasmic reticulum 38.35 35.23
HORVU2Hr1G113460.2 Barley plasma membrane 47.79 33.13
HORVU7Hr1G055310.1 Barley extracellular 44.54 32.33
HORVU2Hr1G121150.1 Barley endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 45.43 31.69
HORVU2Hr1G121440.2 Barley endoplasmic reticulum 43.95 29.8
HORVU1Hr1G075530.3 Barley plastid 39.53 26.43
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10UniProt:A0A287UZV4GO:GO:0003674GO:GO:0003824GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:HORVU6Hr1G084520EnsemblPlants:HORVU6Hr1G084520.5PFAM:PF00112PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139
ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF424InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_AS
InterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00645
SMART:SM00848SUPFAM:SSF54001SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B46DF6ASEG:seg
Description
No Description!
Coordinates
chrchr6H:-:554907510..554908625
Molecular Weight (calculated)
37022.1 Da
IEP (calculated)
6.284
GRAVY (calculated)
-0.281
Length
339 amino acids
Sequence
(BLAST)
001: MTISKALILG ILGCVCFCSS VLATRELNDD LSMVARHESW MVQYGRVYKD ETEKAQRFGV FKANVMFIKS FNVKNRKFYL GVNQFADLTN EEFKTTKANK
101: GYRPSLKRIP TGFRYENVSF DALPVTVDWR TKGAVTPIKD QGQCGCCWAF SAVAATEGIV KLKTGKLISL SEQELVDCDV HGEDQGCEGG LMDDAFKFII
201: KNGGLTTESN YPYTAADDKC KSGTNGAATI KSYEDVPANN EGALMQAVAS QPVSVAVDGG DMTFQFYKGG VMTGSCGTDL DHGIAAIGYG KTSDGTKYWL
301: LKNSWGTTWG ENGYLRMEKD IPDKKGMCGL AMEPSYPTA
Best Arabidopsis Sequence Match ( AT5G45890.1 )
(BLAST)
001: MALKHMQIFL FVAIFSSFCF SITLSRPLDN ELIMQKRHIE WMTKHGRVYA DVKEENNRYV VFKNNVERIE HLNSIPAGRT FKLAVNQFAD LTNDEFRSMY
101: TGFKGVSALS SQSQTKMSPF RYQNVSSGAL PVSVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ QLVDCDTNDF GCEGGLMDTA
201: FEHIKATGGL TTESNYPYKG EDATCNSKKT NPKATSITGY EDVPVNDEQA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAIGYGEST
301: NGSKYWIIKN SWGTKWGESG YMRIQKDVKD KQGLCGLAMK ASYPTI
Arabidopsis Description
SAG12Senescence-specific cysteine protease SAG12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ47]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.