Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G027730.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | HORVU3Hr1G027730.1 | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 92.31 | 93.33 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 91.21 | 92.48 |
| TraesCS6D01G259900.1 | Wheat | plastid | 90.38 | 87.04 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 76.92 | 76.5 |
| EES07368 | Sorghum | extracellular | 72.8 | 74.44 |
| Zm00001d017834_P001 | Maize | extracellular | 60.71 | 71.06 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 59.62 | 62.18 |
| Solyc04g082710.2.1 | Tomato | cytosol | 50.55 | 60.33 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 58.24 | 60.06 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 55.22 | 59.82 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 57.14 | 59.09 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 57.14 | 58.59 |
| Solyc12g094700.1.1 | Tomato | extracellular | 53.02 | 58.31 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 56.87 | 58.15 |
| CDX75496 | Canola | endoplasmic reticulum | 56.87 | 58.15 |
| PGSC0003DMT400075600 | Potato | vacuole | 54.95 | 57.31 |
| KRH60879 | Soybean | endoplasmic reticulum | 54.12 | 56.45 |
| KRH60878 | Soybean | endoplasmic reticulum | 53.57 | 55.87 |
| CDY01351 | Canola | endoplasmic reticulum | 53.85 | 55.84 |
| KRH51561 | Soybean | endoplasmic reticulum | 53.57 | 55.71 |
| KRH51560 | Soybean | endoplasmic reticulum | 53.57 | 55.71 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 54.4 | 55.62 |
| CDY31861 | Canola | endoplasmic reticulum | 53.85 | 55.52 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 53.3 | 55.11 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 53.85 | 55.06 |
| Bra016447.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 54.12 | 55.03 |
| CDX69132 | Canola | plastid | 57.14 | 54.74 |
| CDY33651 | Canola | endoplasmic reticulum | 48.35 | 53.99 |
| CDX96617 | Canola | endoplasmic reticulum | 48.08 | 53.52 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 54.95 | 51.15 |
| CDY31498 | Canola | cytosol | 39.56 | 48.16 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 46.98 | 46.34 |
| HORVU4Hr1G006310.1 | Barley | endoplasmic reticulum, extracellular | 41.76 | 44.06 |
| HORVU2Hr1G009150.1 | Barley | extracellular, vacuole | 41.21 | 43.99 |
| HORVU5Hr1G095580.1 | Barley | endoplasmic reticulum, extracellular | 42.03 | 43.84 |
| HORVU2Hr1G009610.1 | Barley | extracellular | 40.66 | 43.53 |
| HORVU4Hr1G006280.2 | Barley | extracellular | 40.66 | 43.15 |
| HORVU6Hr1G084520.5 | Barley | extracellular | 40.11 | 43.07 |
| HORVU4Hr1G006270.1 | Barley | extracellular, vacuole | 40.38 | 42.98 |
| HORVU2Hr1G009640.1 | Barley | extracellular | 40.11 | 42.94 |
| HORVU2Hr1G009510.1 | Barley | cytosol | 40.38 | 42.86 |
| HORVU7Hr1G044230.3 | Barley | extracellular | 39.84 | 42.65 |
| HORVU1Hr1G060040.1 | Barley | endoplasmic reticulum, extracellular | 39.84 | 42.52 |
| HORVU6Hr1G083420.1 | Barley | extracellular | 39.84 | 42.52 |
| HORVU3Hr1G088270.2 | Barley | extracellular | 42.31 | 41.73 |
| HORVU3Hr1G088080.2 | Barley | endoplasmic reticulum, extracellular | 42.31 | 41.18 |
| HORVU3Hr1G091800.1 | Barley | endoplasmic reticulum | 42.58 | 40.9 |
| HORVU3Hr1G091790.1 | Barley | extracellular | 41.48 | 40.48 |
| HORVU3Hr1G091920.2 | Barley | endoplasmic reticulum | 41.48 | 40.48 |
| HORVU2Hr1G023980.2 | Barley | vacuole | 34.62 | 36.84 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 43.96 | 34.26 |
| HORVU2Hr1G113460.2 | Barley | plasma membrane | 45.6 | 33.95 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 44.78 | 33.54 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 42.31 | 30.8 |
| HORVU1Hr1G075530.3 | Barley | plastid | 38.74 | 27.81 |
Protein Annotations
| MapMan:27.2.10 | Gene3D:3.90.70.10 | UniProt:A0A287UKW8 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU6Hr1G070320 | EnsemblPlants:HORVU6Hr1G070320.2 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS |
| InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 |
| SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI000B467884 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr6H:-:488883518..488885879
Molecular Weight (calculated)
39960.9 Da
IEP (calculated)
6.231
GRAVY (calculated)
-0.332
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSELSIVFF LLLGFAACSC SCSSSRATHH HDPSVVGYSQ EEIALPNRIH DLFSSWSVKH SKVYVTPKEK VRRYEVFRQN LKHIVETNQR NGSYWLGLNQ
101: FADVAHEEFK AGYLGLSTGL AGAGVRPRGP TTAFRYEAAV DLPWEVDWRK KGAVTPVKNQ GKCGSCWAFS TVAAVEGINQ IVTGRLESLS EQELMDCDST
201: FDHGCGGGLM DFAYAYIVGN QGIHTDGDYP YLMEEGDCKE KQPHSKVVTI SGYEDVPENS ELSLLKALAH QPVSVGIAAG SRDFQFYKGG VFEGTCGAQL
301: DHALTAVGYG EDYIIMKNSW GGGWGEQGYF RIKRGTGRPE GVCDIYRIAS YPTKNNGTGW GWGA
101: FADVAHEEFK AGYLGLSTGL AGAGVRPRGP TTAFRYEAAV DLPWEVDWRK KGAVTPVKNQ GKCGSCWAFS TVAAVEGINQ IVTGRLESLS EQELMDCDST
201: FDHGCGGGLM DFAYAYIVGN QGIHTDGDYP YLMEEGDCKE KQPHSKVVTI SGYEDVPENS ELSLLKALAH QPVSVGIAAG SRDFQFYKGG VFEGTCGAQL
301: DHALTAVGYG EDYIIMKNSW GGGWGEQGYF RIKRGTGRPE GVCDIYRIAS YPTKNNGTGW GWGA
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.