Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
TargetP:secretory
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G378700.1 Wheat cytosol, mitochondrion, nucleus 41.94 96.62
TraesCS6A01G345600.1 Wheat cytosol, mitochondrion, nucleus 41.35 95.27
TraesCS6D01G328600.1 Wheat extracellular 93.55 94.1
TraesCS6D01G328500.1 Wheat extracellular 93.55 94.1
TraesCS6D01G328000.1 Wheat extracellular 93.55 94.1
TraesCS6B01G379200.1 Wheat extracellular 93.55 94.1
TraesCS6A01G345900.1 Wheat extracellular 93.26 93.81
TraesCS6B01G378400.1 Wheat extracellular 93.26 93.81
TraesCS6B01G379300.1 Wheat extracellular 92.96 93.51
TraesCS6B01G378900.1 Wheat extracellular 92.96 93.51
TraesCS6D01G328300.1 Wheat extracellular 92.67 93.22
TraesCS6D01G328100.1 Wheat extracellular 92.67 93.22
TraesCS6B01G379000.1 Wheat extracellular 92.38 92.92
TraesCS6A01G346800.1 Wheat extracellular 91.79 92.33
HORVU6Hr1G084520.5 Barley extracellular 90.91 91.45
TraesCS6D01G329900.1 Wheat extracellular 90.62 91.15
Zm00001d037301_P001 Maize mitochondrion 53.37 85.85
TraesCS7B01G292000.1 Wheat cytosol, extracellular, nucleus 76.54 85.02
KXG19778 Sorghum cytosol, nucleus, plastid 76.54 84.74
HORVU7Hr1G044230.3 Barley extracellular 83.87 84.12
Os04t0206300-00 Rice extracellular 83.58 84.07
HORVU1Hr1G060040.1 Barley endoplasmic reticulum, extracellular 82.99 82.99
EER89590 Sorghum extracellular 82.11 82.35
KXG19777 Sorghum extracellular 81.82 82.06
EES10550 Sorghum extracellular 81.82 82.06
KXG19775 Sorghum extracellular 81.82 82.06
HORVU2Hr1G009150.1 Barley extracellular, vacuole 81.52 81.52
Zm00001d045713_P001 Maize extracellular 80.35 80.59
Zm00001d037303_P001 Maize extracellular 80.35 80.59
Zm00001d045711_P001 Maize extracellular 80.06 80.29
HORVU2Hr1G009640.1 Barley extracellular 79.77 80.0
Zm00001d045709_P001 Maize extracellular 73.02 79.3
HORVU2Hr1G009610.1 Barley extracellular 78.89 79.12
HORVU4Hr1G006310.1 Barley endoplasmic reticulum, extracellular 79.47 78.55
HORVU4Hr1G006270.1 Barley extracellular, vacuole 77.13 76.9
HORVU4Hr1G006280.2 Barley extracellular 77.13 76.68
HORVU2Hr1G009510.1 Barley cytosol 76.54 76.09
Zm00001d045708_P001 Maize extracellular 72.73 75.38
TraesCS6D01G329300.1 Wheat extracellular 65.98 70.75
HORVU2Hr1G023980.2 Barley vacuole 65.98 65.79
Solyc02g076970.1.1 Tomato extracellular 51.91 62.99
VIT_12s0028g02250.t01 Wine grape cytosol 54.25 62.29
Solyc12g056010.1.1 Tomato endoplasmic reticulum 60.7 60.88
PGSC0003DMT400012877 Potato endoplasmic reticulum, extracellular, vacuole 60.41 60.59
PGSC0003DMT400086163 Potato cytosol 41.35 60.52
PGSC0003DMT400026457 Potato extracellular 55.72 60.51
VIT_10s0003g01100.t01 Wine grape extracellular 60.12 60.29
Solyc12g056020.1.1 Tomato extracellular 59.82 59.82
KRH55800 Soybean endoplasmic reticulum, golgi 60.12 59.77
PGSC0003DMT400012881 Potato endoplasmic reticulum 59.53 59.71
PGSC0003DMT400026461 Potato extracellular 59.53 59.71
Solyc12g056000.1.1 Tomato endoplasmic reticulum 59.53 59.71
KRG88605 Soybean endoplasmic reticulum, golgi 59.82 59.48
KRH25729 Soybean endoplasmic reticulum, golgi 59.82 59.48
KRH25765 Soybean endoplasmic reticulum, golgi 59.82 59.48
KRG88601 Soybean endoplasmic reticulum, golgi 59.82 59.48
VIT_12s0028g02290.t01 Wine grape endoplasmic reticulum, extracellular 59.24 59.24
PGSC0003DMT400012885 Potato extracellular 53.67 59.22
VIT_12s0028g02270.t01 Wine grape endoplasmic reticulum, extracellular 58.94 58.94
VIT_12s0028g02300.t01 Wine grape endoplasmic reticulum, extracellular 58.94 58.94
KRH55771 Soybean cytosol, nucleus 48.39 58.93
KRH55761 Soybean extracellular 58.94 58.6
KRH55750 Soybean extracellular 58.94 58.6
KRH25728 Soybean extracellular 58.94 58.6
KRH25039 Soybean extracellular, golgi, vacuole 53.67 58.47
KRH55801 Soybean golgi, vacuole 58.65 58.31
KRH25766 Soybean extracellular 58.65 58.31
VIT_12s0028g02260.t01 Wine grape endoplasmic reticulum, extracellular 54.25 57.45
KRH29892 Soybean extracellular, golgi, vacuole 57.48 57.14
KRH55752 Soybean endoplasmic reticulum 56.01 55.69
KRH55762 Soybean endoplasmic reticulum 55.72 55.39
Solyc03g006200.1.1 Tomato endoplasmic reticulum, extracellular 49.27 55.26
KRH55769 Soybean extracellular, vacuole 56.6 54.83
KRH13244 Soybean extracellular 53.37 54.82
KRH25038 Soybean extracellular 54.25 53.94
HORVU5Hr1G095580.1 Barley endoplasmic reticulum, extracellular 53.08 51.86
HORVU3Hr1G091800.1 Barley endoplasmic reticulum 48.09 43.27
HORVU3Hr1G088270.2 Barley extracellular 46.33 42.82
HORVU3Hr1G091790.1 Barley extracellular 46.63 42.63
HORVU3Hr1G091920.2 Barley endoplasmic reticulum 46.63 42.63
HORVU3Hr1G088080.2 Barley endoplasmic reticulum, extracellular 46.63 42.51
HORVU6Hr1G070320.2 Barley endoplasmic reticulum, extracellular 42.52 39.84
HORVU1Hr1G003940.6 Barley endoplasmic reticulum 37.54 34.69
HORVU2Hr1G113460.2 Barley plasma membrane 47.51 33.13
HORVU7Hr1G055310.1 Barley extracellular 44.28 32.33
HORVU2Hr1G121150.1 Barley endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 45.16 31.69
HORVU2Hr1G121440.2 Barley endoplasmic reticulum 43.4 29.6
HORVU1Hr1G075530.3 Barley plastid 38.71 26.04
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10UniProt:A0A287UYM0GO:GO:0003674GO:GO:0003824GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0016787GO:GO:0019538
EnsemblPlantsGene:HORVU6Hr1G083420EnsemblPlants:HORVU6Hr1G083420.1PFAM:PF00112PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139
ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF424InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_AS
InterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00645
SMART:SM00848SUPFAM:SSF54001SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B46888DSEG:seg
Description
No Description!
Coordinates
chrchr6H:+:551254801..551255920
Molecular Weight (calculated)
37296.3 Da
IEP (calculated)
5.440
GRAVY (calculated)
-0.291
Length
341 amino acids
Sequence
(BLAST)
001: HMMAISKALI IGILGCLCFC SSVLAARELN DDLSMMARHE SWMVQYNRVY KDATEKAHRF EVFKTNVGFI KSFNAENHKF YLGINQFTDL TNEEFKGTKA
101: NKGYKPNMDR VPTGFRYENV SLDALPATVD WRTKGAVTPI KDQGQCGCCW AFSAVAATEG IVKLKTSKLI SLSEQELVDC DVHGEDQGCE GGLMDDAFKF
201: IIKNGGLTTE SNYPYTAADD KCKSGTNGVA TIKSYEDVPA NNEGALMQAV ASQPVSVAVD GGDMTFQFYK GGVMTGSCGT DLDHGIAAIG YGKISDGTKY
301: WLLKNSWGTT WGENGYLRME KDITDKRGMC GLAMEPSYPT A
Best Arabidopsis Sequence Match ( AT2G27420.1 )
(BLAST)
001: MASTIIFILT IFLSYRTSLA TSRGSLFEAS AIEKHEQWMA RFNRVYSDET EKRNRFNIFK KNLEFVQNFN MNNKITYKVD INEFSDLTDE EFRATHTGLV
101: VPEAITRIST LSSGKNTVPF RYGNVSDNGE SMDWRQEGAV TPVKYQGRCG GCWAFSAVAA VEGITKITKG ELVSLSEQQL LDCDRDYNQG CRGGIMSKAF
201: EYIIKNQGIT TEDNYPYQES QQTCSSSTTL SSSFRAATIS GYETVPMNNE EALLQAVSQQ PVSVGIEGTG AAFRHYSGGV FNGECGTDLH HAVTIVGYGM
301: SEEGTKYWVV KNSWGETWGE NGYMRIKRDV DAPQGMCGLA ILAFYPLA
Arabidopsis Description
Cysteine proteinase [Source:UniProtKB/TrEMBL;Acc:Q9ZQH7]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.