Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 94.22 | 94.02 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 95.29 | 93.88 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 92.51 | 93.71 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 46.04 | 83.33 |
| Os04t0670500-01 | Rice | extracellular | 73.02 | 69.59 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 71.73 | 68.93 |
| EES11628 | Sorghum | extracellular | 68.74 | 68.15 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 65.31 | 61.0 |
| VIT_07s0031g00050.t01 | Wine grape | nucleus | 42.18 | 59.7 |
| VIT_03s0180g00010.t01 | Wine grape | extracellular | 53.32 | 58.45 |
| Solyc01g107760.2.1 | Tomato | extracellular | 55.46 | 55.11 |
| PGSC0003DMT400066566 | Potato | endoplasmic reticulum | 55.25 | 54.89 |
| KRH57968 | Soybean | endoplasmic reticulum | 42.83 | 54.64 |
| Solyc02g093040.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 42.18 | 54.27 |
| KRH07581 | Soybean | endoplasmic reticulum | 42.4 | 54.1 |
| HORVU2Hr1G113460.2 | Barley | plasma membrane | 56.32 | 53.78 |
| PGSC0003DMT400064314 | Potato | endoplasmic reticulum, extracellular, vacuole | 41.54 | 53.74 |
| KRH04538 | Soybean | extracellular | 41.97 | 53.55 |
| AT3G19400.1 | Thale cress | endoplasmic reticulum, vacuole | 41.11 | 53.04 |
| PGSC0003DMT400053921 | Potato | extracellular | 41.33 | 53.02 |
| CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.75 | 52.78 |
| CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.75 | 52.78 |
| Bra022418.1-P | Field mustard | endoplasmic reticulum | 50.54 | 52.44 |
| CDY46179 | Canola | endoplasmic reticulum | 50.54 | 52.44 |
| AT3G19390.1 | Thale cress | endoplasmic reticulum | 50.75 | 52.43 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 41.76 | 52.14 |
| CDY22445 | Canola | vacuole | 41.76 | 52.14 |
| Bra011746.1-P | Field mustard | vacuole | 41.33 | 51.6 |
| CDX75633 | Canola | vacuole | 41.33 | 51.6 |
| AT4G36880.1 | Thale cress | vacuole | 41.54 | 51.6 |
| CDY50154 | Canola | endoplasmic reticulum | 48.18 | 51.14 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 40.9 | 51.07 |
| CDX95451 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.97 | 50.91 |
| Bra038206.1-P | Field mustard | extracellular, plasma membrane, vacuole | 49.04 | 50.89 |
| Bra038208.1-P | Field mustard | endoplasmic reticulum | 47.97 | 50.79 |
| CDY44047 | Canola | vacuole | 41.54 | 50.52 |
| Solyc03g044230.1.1 | Tomato | extracellular | 40.9 | 50.4 |
| HORVU3Hr1G088270.2 | Barley | extracellular | 37.26 | 47.15 |
| HORVU2Hr1G009150.1 | Barley | extracellular, vacuole | 34.05 | 46.63 |
| CDX99227 | Canola | endoplasmic reticulum | 50.32 | 46.35 |
| HORVU3Hr1G088080.2 | Barley | endoplasmic reticulum, extracellular | 37.05 | 46.26 |
| HORVU5Hr1G095580.1 | Barley | endoplasmic reticulum, extracellular | 34.48 | 46.13 |
| HORVU4Hr1G006310.1 | Barley | endoplasmic reticulum, extracellular | 34.05 | 46.09 |
| HORVU4Hr1G006270.1 | Barley | extracellular, vacuole | 33.62 | 45.91 |
| HORVU2Hr1G009610.1 | Barley | extracellular | 33.4 | 45.88 |
| HORVU2Hr1G009640.1 | Barley | extracellular | 33.4 | 45.88 |
| HORVU2Hr1G009510.1 | Barley | cytosol | 33.62 | 45.77 |
| HORVU4Hr1G006280.2 | Barley | extracellular | 33.4 | 45.48 |
| HORVU1Hr1G060040.1 | Barley | endoplasmic reticulum, extracellular | 32.76 | 44.87 |
| HORVU6Hr1G084520.5 | Barley | extracellular | 32.33 | 44.54 |
| HORVU6Hr1G083420.1 | Barley | extracellular | 32.33 | 44.28 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 34.26 | 43.96 |
| HORVU3Hr1G091800.1 | Barley | endoplasmic reticulum | 35.12 | 43.27 |
| HORVU3Hr1G091790.1 | Barley | extracellular | 34.48 | 43.16 |
| HORVU3Hr1G091920.2 | Barley | endoplasmic reticulum | 34.48 | 43.16 |
| HORVU7Hr1G044230.3 | Barley | extracellular | 31.05 | 42.65 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 32.33 | 40.92 |
| HORVU2Hr1G023980.2 | Barley | vacuole | 28.69 | 39.18 |
| HORVU1Hr1G075530.3 | Barley | plastid | 39.61 | 36.49 |
Protein Annotations
| Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | UniProt:A0A287WKC6 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:Granulin | InterPro:Granulin_sf | EnsemblPlantsGene:HORVU7Hr1G055310 | EnsemblPlants:HORVU7Hr1G055310.1 | InterPro:IPR037277 | PFAM:PF00112 |
| PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF343 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C |
| InterPro:Prot_inhib_I29 | SMART:SM00277 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B460EC3 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:-:226129155..226130687
Molecular Weight (calculated)
50084.9 Da
IEP (calculated)
7.646
GRAVY (calculated)
-0.352
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGSKAAAA VAMVLAFLLF AVASSAAAGA PDMSIVSYNS AHAVRGLERT EAEVRAMYDH WLARHGRSYN ALGEYDRRFR AFWDNLRLVD AHNADADAHG
101: FRLGMNRFAD LTNDEFRAAY LGAIPSGQGR HTVGERYLHD GAETLPESVD WRAKGAVAPV KNQGQCGSCW AFSAVGAVEG INKIVTGDLV TLSEQELVEC
201: ARNGQNSGCN GGMMEDAFDF IARNGGIDTE ADYPYTAKDG RCDLAKRSRT VVSIDGFESV PENDELSLKK AVAHQPVSVG IEAGGPEFQL YESGVFIGRC
301: GTELDHGVVA VGYGTDNGRD YWSVRNSWGA GWGEGGYIRM ERNVTARTGK CGIAMMASYP VKNGPNPSPK PNPPKPKPVA CDRHSKCPAG STCCCTHGVR
401: KTCFVWGCCP AKGAVCCKDG ATCCPSDYPV CNDQNRTCSK SKNSPYTVEA LIRTPAKRSR TTTITKL
101: FRLGMNRFAD LTNDEFRAAY LGAIPSGQGR HTVGERYLHD GAETLPESVD WRAKGAVAPV KNQGQCGSCW AFSAVGAVEG INKIVTGDLV TLSEQELVEC
201: ARNGQNSGCN GGMMEDAFDF IARNGGIDTE ADYPYTAKDG RCDLAKRSRT VVSIDGFESV PENDELSLKK AVAHQPVSVG IEAGGPEFQL YESGVFIGRC
301: GTELDHGVVA VGYGTDNGRD YWSVRNSWGA GWGEGGYIRM ERNVTARTGK CGIAMMASYP VKNGPNPSPK PNPPKPKPVA CDRHSKCPAG STCCCTHGVR
401: KTCFVWGCCP AKGAVCCKDG ATCCPSDYPV CNDQNRTCSK SKNSPYTVEA LIRTPAKRSR TTTITKL
001: MGFLKLSPMI LLLAMIGVSY AMDMSIISYD ENHHITTETS RSDSEVERIY EAWMVEHGKK KMNQNGLGAE KDQRFEIFKD NLRFIDEHNT KNLSYKLGLT
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
Arabidopsis Description
RD21BProbable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.