Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- vacuole 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400064314 | Potato | endoplasmic reticulum, extracellular, vacuole | 69.09 | 63.16 |
| Solyc02g093040.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 68.48 | 62.26 |
| PGSC0003DMT400053921 | Potato | extracellular | 68.48 | 62.09 |
| KRH04538 | Soybean | extracellular | 66.97 | 60.38 |
| KRH57968 | Soybean | endoplasmic reticulum | 66.67 | 60.11 |
| KRH07581 | Soybean | endoplasmic reticulum | 66.06 | 59.56 |
| Solyc03g044230.1.1 | Tomato | extracellular | 66.97 | 58.31 |
| AT4G36880.1 | Thale cress | vacuole | 66.36 | 58.24 |
| VIT_12s0028g02250.t01 | Wine grape | cytosol | 51.21 | 56.9 |
| CDX75633 | Canola | vacuole | 64.24 | 56.68 |
| CDY22445 | Canola | vacuole | 64.24 | 56.68 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 63.94 | 56.42 |
| Bra011746.1-P | Field mustard | vacuole | 63.94 | 56.42 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 63.33 | 55.88 |
| CDY44047 | Canola | vacuole | 63.64 | 54.69 |
| VIT_03s0180g00010.t01 | Wine grape | extracellular | 67.88 | 52.58 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 53.03 | 52.08 |
| VIT_10s0003g01100.t01 | Wine grape | extracellular | 52.42 | 50.88 |
| VIT_18s0001g09990.t01 | Wine grape | endoplasmic reticulum | 71.82 | 50.75 |
| VIT_12s0028g02270.t01 | Wine grape | endoplasmic reticulum, extracellular | 52.42 | 50.73 |
| VIT_03s0038g04000.t01 | Wine grape | vacuole | 53.64 | 50.28 |
| VIT_12s0028g02290.t01 | Wine grape | endoplasmic reticulum, extracellular | 51.82 | 50.15 |
| VIT_12s0028g02300.t01 | Wine grape | endoplasmic reticulum, extracellular | 51.21 | 49.56 |
| VIT_17s0000g09770.t01 | Wine grape | endoplasmic reticulum | 53.33 | 48.89 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 54.24 | 48.64 |
| VIT_12s0028g02260.t01 | Wine grape | endoplasmic reticulum, extracellular | 47.27 | 48.45 |
| VIT_01s0137g00330.t01 | Wine grape | endoplasmic reticulum | 51.82 | 47.63 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 61.82 | 43.87 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 62.12 | 43.62 |
| EES11628 | Sorghum | extracellular | 61.82 | 43.31 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 60.91 | 42.95 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 60.91 | 42.86 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 60.91 | 42.86 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 60.61 | 42.73 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 60.3 | 42.61 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 60.3 | 42.52 |
| TraesCS2A01G545700.1 | Wheat | unclear | 60.61 | 42.37 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 60.0 | 42.31 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 33.03 | 42.25 |
| TraesCS2B01G576300.1 | Wheat | unclear | 60.0 | 42.22 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 59.7 | 42.18 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 58.79 | 42.08 |
| Os04t0670500-01 | Rice | extracellular | 62.42 | 42.04 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 60.3 | 41.89 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 60.91 | 41.36 |
| Os04t0670200-02 | Rice | extracellular | 61.52 | 41.26 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 59.09 | 41.14 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 58.18 | 38.4 |
| VIT_18s0001g13270.t01 | Wine grape | extracellular | 46.67 | 35.32 |
Protein Annotations
| EntrezGene:100261257 | wikigene:100261257 | Gene3D:3.90.70.10 | MapMan:50.3.4 | MEROPS:C01.029 | ProteinID:CCB47040 |
| ProteinID:CCB47040.1 | UniProt:F6H4F8 | EMBL:FN595233 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 |
| EntrezGene:LOC100261257 | wikigene:LOC100261257 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 |
| ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF526 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS |
| InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 |
| SMART:SM00848 | SUPFAM:SSF54001 | TIGR:TC65903 | UniParc:UPI00021083E9 | ArrayExpress:VIT_07s0031g00050 | EnsemblPlantsGene:VIT_07s0031g00050 |
| EnsemblPlants:VIT_07s0031g00050.t01 | unigene:Vvi.17276 | unigene:Vvi.9239 | RefSeq:XP_002283263 | RefSeq:XP_002283263.1 | : |
Description
No Description!
Coordinates
chr7:-:16300918..16302994
Molecular Weight (calculated)
36436.6 Da
IEP (calculated)
4.766
GRAVY (calculated)
-0.463
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQWWMAKHG KAYNGLGEKE KRFEIFKDNL KFIDEHNAQN RTYKVGLNRF ADLTNEEYRA IYLGTRSDPK RRFAKLKNAS PRYAVMPGEV LPESVDWRET
101: GAVNPVKDQR SCGSCWAFST VAAVEGINQI VTGELISLSE QELVDCDTEY DMGCNGGLMD YAFDFIIKNG GLDTEKDYPY TGFDGECNLS GKSSKVVSID
201: GYEDVPPFDE KALQKAVAHQ PVSVAVEAGG RALQLYVSGI FTGECGTALD HGIVAVGYGT ENGTDYWIVR NSWGSSWGEN GYIRMERNMA DAFSGKCGIA
301: MEASYPIKNG ENPSKTYLSF GTAGEKISSA
101: GAVNPVKDQR SCGSCWAFST VAAVEGINQI VTGELISLSE QELVDCDTEY DMGCNGGLMD YAFDFIIKNG GLDTEKDYPY TGFDGECNLS GKSSKVVSID
201: GYEDVPPFDE KALQKAVAHQ PVSVAVEAGG RALQLYVSGI FTGECGTALD HGIVAVGYGT ENGTDYWIVR NSWGSSWGEN GYIRMERNMA DAFSGKCGIA
301: MEASYPIKNG ENPSKTYLSF GTAGEKISSA
001: MAPSTKVLSL LLLYVVVSLA SGDESIINDH LQLPSDGKWR TDEEVRSIYL QWSAEHGKTN NNNNGIINDQ DKRFNIFKDN LRFIDLHNEN NKNATYKLGL
101: TKFTDLTNDE YRKLYLGART EPARRIAKAK NVNQKYSAAV NGKEVPETVD WRQKGAVNPI KDQGTCGSCW AFSTTAAVEG INKIVTGELI SLSEQELVDC
201: DKSYNQGCNG GLMDYAFQFI MKNGGLNTEK DYPYRGFGGK CNSFLKNSRV VSIDGYEDVP TKDETALKKA ISYQPVSVAI EAGGRIFQHY QSGIFTGSCG
301: TNLDHAVVAV GYGSENGVDY WIVRNSWGPR WGEEGYIRME RNLAASKSGK CGIAVEASYP VKYSPNPVRG NTISSV
101: TKFTDLTNDE YRKLYLGART EPARRIAKAK NVNQKYSAAV NGKEVPETVD WRQKGAVNPI KDQGTCGSCW AFSTTAAVEG INKIVTGELI SLSEQELVDC
201: DKSYNQGCNG GLMDYAFQFI MKNGGLNTEK DYPYRGFGGK CNSFLKNSRV VSIDGYEDVP TKDETALKKA ISYQPVSVAI EAGGRIFQHY QSGIFTGSCG
301: TNLDHAVVAV GYGSENGVDY WIVRNSWGPR WGEEGYIRME RNLAASKSGK CGIAVEASYP VKYSPNPVRG NTISSV
Arabidopsis Description
CP1CP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UST0]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.