Factsheet for TraesCS2B01G577300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G306500.1
TraesCS2A01G512100.1
TraesCS2B01G323200.1
TraesCS2B01G540100.2
TraesCS2D01G305000.1
TraesCS2D01G513600.1
TraesCS4A01G214200.2
TraesCS4B01G101800.3
TraesCS4D01G098400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19390.1	TraesCS2A01G306500.1	AT1G21750.1	18676877
AT3G19390.1	TraesCS2B01G323200.1	AT1G21750.1	18676877
AT3G19390.1	TraesCS2D01G305000.1	AT1G21750.1	18676877
AT3G19390.1	TraesCS4A01G214200.2	AT1G21750.1	18676877
AT3G19390.1	TraesCS4B01G101800.3	AT1G21750.1	18676877
AT3G19390.1	TraesCS4D01G098400.1	AT1G21750.1	18676877
AT3G19390.1	TraesCS2A01G512100.1	AT1G47128.1	26016527
AT3G19390.1	TraesCS2B01G540100.2	AT1G47128.1	26016527
AT3G19390.1	TraesCS2D01G513600.1	AT1G47128.1	26016527

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G547600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	74.41	94.84
TraesCS2A01G546300.1	Wheat	endoplasmic reticulum, vacuole	93.39	93.39
TraesCS2B01G577500.1	Wheat	endoplasmic reticulum	93.18	93.38
TraesCS2D01G547800.1	Wheat	endoplasmic reticulum, extracellular	92.54	92.73
TraesCS2A01G546700.1	Wheat	endoplasmic reticulum	92.11	92.31
HORVU2Hr1G121150.1	Barley	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	89.55	86.42
TraesCS7B01G162200.1	Wheat	endoplasmic reticulum	71.22	72.45
EES11628	Sorghum	extracellular	69.3	69.0
Os04t0670500-01	Rice	extracellular	70.36	67.35
TraesCS2B01G576300.1	Wheat	unclear	64.18	64.18
VIT_07s0031g00050.t01	Wine grape	nucleus	42.86	60.91
VIT_03s0180g00010.t01	Wine grape	extracellular	55.22	60.8
TraesCS2B01G540100.2	Wheat	golgi	55.65	56.37
KRH57968	Soybean	endoplasmic reticulum	43.28	55.46
KRH07581	Soybean	endoplasmic reticulum	42.86	54.92
Solyc02g093040.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	42.43	54.82
PGSC0003DMT400064314	Potato	endoplasmic reticulum, extracellular, vacuole	42.0	54.57
KRH04538	Soybean	extracellular	42.43	54.37
Solyc01g107760.2.1	Tomato	extracellular	54.16	54.04
PGSC0003DMT400066566	Potato	endoplasmic reticulum	53.73	53.62
AT3G19390.1	Thale cress	endoplasmic reticulum	51.6	53.54
TraesCS6B01G378700.1	Wheat	cytosol, mitochondrion, nucleus	16.84	53.38
TraesCS6B01G379900.1	Wheat	cytosol, mitochondrion, nucleus	16.84	53.38
PGSC0003DMT400053921	Potato	extracellular	41.36	53.3
CDY50157	Canola	endoplasmic reticulum, extracellular, vacuole	50.96	53.23
Bra010592.1-P	Field mustard	extracellular, golgi, vacuole	42.43	53.21
CDY46179	Canola	endoplasmic reticulum	50.96	53.11
Bra022418.1-P	Field mustard	endoplasmic reticulum	50.96	53.11
CDY50154	Canola	endoplasmic reticulum	49.68	52.95
CDY22445	Canola	vacuole	42.22	52.94
CDX95457	Canola	endoplasmic reticulum, extracellular, vacuole	50.53	52.78
AT4G36880.1	Thale cress	vacuole	42.22	52.66
Bra038208.1-P	Field mustard	endoplasmic reticulum	49.47	52.61
CDX95451	Canola	endoplasmic reticulum, extracellular, vacuole	49.25	52.5
AT3G19400.1	Thale cress	endoplasmic reticulum, vacuole	40.51	52.49
CDX75633	Canola	vacuole	41.36	51.87
Bra011746.1-P	Field mustard	vacuole	41.15	51.6
CDX69285	Canola	endoplasmic reticulum, vacuole	41.15	51.6
CDY44047	Canola	vacuole	42.22	51.56
Bra038206.1-P	Field mustard	extracellular, plasma membrane, vacuole	49.47	51.56
TraesCS1B01G033200.1	Wheat	endoplasmic reticulum, extracellular, golgi	38.59	51.42
TraesCS5B01G138300.1	Wheat	endoplasmic reticulum, golgi, vacuole	38.59	50.84
Solyc03g044230.1.1	Tomato	extracellular	40.94	50.66
TraesCS5B01G072400.1	Wheat	extracellular	35.82	49.85
TraesCS4B01G039600.1	Wheat	extracellular	36.03	49.56
TraesCS2B01G067900.1	Wheat	extracellular	35.82	49.41
TraesCS6B01G182100.1	Wheat	endoplasmic reticulum, extracellular	35.82	49.12
TraesCS4B01G039700.1	Wheat	extracellular	35.61	48.97
TraesCS4B01G039800.1	Wheat	extracellular	35.61	48.97
TraesCS6B01G182200.1	Wheat	extracellular	35.61	48.83
TraesCS2B01G067800.1	Wheat	extracellular	35.39	48.82
TraesCS2B01G067700.1	Wheat	extracellular	35.39	48.82
TraesCS4B01G039900.1	Wheat	endoplasmic reticulum, extracellular	35.39	48.68
TraesCS4B01G039500.1	Wheat	extracellular	34.97	48.09
TraesCS1B01G236800.1	Wheat	extracellular	34.75	48.08
TraesCS6B01G379000.1	Wheat	extracellular	34.75	48.08
TraesCS6B01G378900.1	Wheat	extracellular	34.75	48.08
TraesCS3B01G380400.1	Wheat	golgi	37.31	48.08
TraesCS6B01G380200.1	Wheat	extracellular	34.54	47.79
TraesCS6B01G378400.1	Wheat	extracellular	34.54	47.79
TraesCS3B01G447500.1	Wheat	extracellular, vacuole	37.74	47.71
TraesCS6B01G379300.1	Wheat	extracellular	34.33	47.49
TraesCS2B01G068000.1	Wheat	extracellular, golgi, plastid	29.21	47.24
TraesCS4B01G040000.1	Wheat	endoplasmic reticulum, extracellular	34.33	47.21
TraesCS6B01G380000.1	Wheat	extracellular	33.9	46.9
TraesCS3B01G378600.1	Wheat	endoplasmic reticulum	36.89	46.88
TraesCS5B01G523100.1	Wheat	extracellular	33.9	46.76
TraesCS6B01G379200.1	Wheat	extracellular	33.69	46.61
TraesCS7B01G292000.1	Wheat	cytosol, extracellular, nucleus	30.49	46.58
CDX99227	Canola	endoplasmic reticulum	50.32	46.55
TraesCS7B01G387600.1	Wheat	extracellular	33.69	46.47
TraesCS6B01G308300.1	Wheat	extracellular, vacuole	35.39	46.24
TraesCS3B01G447400.1	Wheat	endoplasmic reticulum	36.67	45.99
TraesCS4B01G076200.1	Wheat	endoplasmic reticulum	37.74	44.25
TraesCS1B01G338500.1	Wheat	endoplasmic reticulum, unclear	41.36	41.99

Protein Annotations

Gene3D:3.10.20.500	Gene3D:3.90.70.10	MapMan:50.3.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	InterPro:Granulin
InterPro:Granulin_sf	InterPro:IPR037277	PFAM:PF00112	PFAM:PF00396	PFAM:PF08246	PRINTS:PR00705
ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF343	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29
SMART:SM00277	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SUPFAM:SSF57277	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G577300	EnsemblPlants:TraesCS2B01G577300.1	TIGR:cd02248	SEG:seg	:

Description

No Description!

Coordinates

chr2B:+:765586453..765587862

Molecular Weight (calculated)

50125.8 Da

IEP (calculated)

6.911

GRAVY (calculated)

-0.255

Length

469 amino acids

Sequence
(BLAST)

001: MAGRGAAAAV AALLFLVFFA ASSSAAAAHV DNVADHGARG LTRRTEADVR AMFDAWLARH GRSYNALAEY VRRFRAFRDN LDFVEAHNAR AAQRGGFRLG
101: MNRFADLTNA EFRAAYLGAG AAGRARNAVG ERYRYHAEDV LPASVDWREK GAVAPVKNQG QCGSCWAFST VAAVEGINKI VTGDLVTLSE QELVDCSRNG
201: QNNGCNGGIM DDAFDFIVRN GGIDTEEDYP YTAKEGKCDL AKKAHTVVSI DGFEDVPADD EASLMKAVAH QPVSVAIEAG GREFQLYESG VFTGRCGTEL
301: DHAVLAVGYG TEAADGGKDY WLVRNSWGPG WGESGYIRME RNVTARAGKC GIAMFASYPV KTGPNPKPAP PAPEEKCDRY CSCPAGSTCC CTYGVRSVCL
401: AWGCCPAEGA TCCRDHATCC PSEYPVCNAG KRTCGKSKGS PYSVDALPRT PAKRQRTAVS ELVDSIFSI

Best Arabidopsis Sequence Match ( AT1G09850.1 )
(BLAST)

001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM

Arabidopsis Description

XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.