Factsheet for Bra022418.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 7
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012293.1-P
Bra014057.1-P
Bra016405.1-P
Bra017948.1-P
Bra040749.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19390.1	Bra012293.1-P	AT1G21750.1	18676877
AT3G19390.1	Bra016405.1-P	AT1G21750.1	18676877
AT3G19390.1	Bra017948.1-P	AT1G21750.1	18676877
AT3G19390.1	Bra014057.1-P	AT1G47128.1	26016527
AT3G19390.1	Bra040749.1-P	AT1G47128.1	26016527

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46179	Canola	endoplasmic reticulum	99.78	99.78
Bra038206.1-P	Field mustard	extracellular, plasma membrane, vacuole	86.89	86.89
AT3G19390.1	Thale cress	endoplasmic reticulum	83.56	83.19
Bra038208.1-P	Field mustard	endoplasmic reticulum	77.78	79.37
Bra033657.1-P	Field mustard	extracellular	61.78	60.43
Bra040749.1-P	Field mustard	endoplasmic reticulum	59.78	58.86
Bra014057.1-P	Field mustard	endoplasmic reticulum	59.56	58.39
TraesCS2D01G547600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	46.67	57.07
TraesCS7D01G265100.1	Wheat	cytosol, nucleus, plastid	31.33	54.65
Zm00001d001900_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	56.22	54.41
TraesCS2A01G545700.1	Wheat	unclear	56.89	54.24
TraesCS2B01G576300.1	Wheat	unclear	56.22	53.94
TraesCS2D01G546600.1	Wheat	plasma membrane, vacuole	56.89	53.89
Zm00001d026577_P001	Maize	extracellular, golgi, plasma membrane	56.22	53.83
EES13064	Sorghum	extracellular, plasma membrane, vacuole	55.56	53.53
Bra011746.1-P	Field mustard	vacuole	44.44	53.48
Bra010592.1-P	Field mustard	extracellular, golgi, vacuole	44.44	53.48
Bra013705.1-P	Field mustard	extracellular	38.44	52.74
Bra018067.1-P	Field mustard	endoplasmic reticulum	41.56	52.09
TraesCS7B01G162200.1	Wheat	endoplasmic reticulum	52.22	50.98
TraesCS2B01G577300.1	Wheat	extracellular, golgi	53.11	50.96
Os04t0670200-02	Rice	extracellular	55.56	50.81
HORVU7Hr1G055310.1	Barley	extracellular	52.44	50.54
Bra012252.1-P	Field mustard	endoplasmic reticulum	39.33	50.28
TraesCS5D01G149800.1	Wheat	endoplasmic reticulum	52.0	50.0
Bra011608.1-P	Field mustard	endoplasmic reticulum	39.56	50.0
TraesCS7A01G264200.1	Wheat	endoplasmic reticulum	52.44	49.79
TraesCS2A01G546700.1	Wheat	endoplasmic reticulum	51.78	49.79
TraesCS2D01G547800.1	Wheat	endoplasmic reticulum, extracellular	51.78	49.79
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	39.56	49.72
EES11628	Sorghum	extracellular	52.0	49.68
TraesCS2A01G546300.1	Wheat	endoplasmic reticulum, vacuole	51.78	49.68
TraesCS2B01G577500.1	Wheat	endoplasmic reticulum	51.56	49.57
HORVU2Hr1G121440.2	Barley	endoplasmic reticulum	54.44	49.0
Os04t0670500-01	Rice	extracellular	53.11	48.78
Bra000615.1-P	Field mustard	endoplasmic reticulum	38.67	48.2
HORVU2Hr1G121150.1	Barley	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	51.56	47.74
Bra021998.1-P	Field mustard	endoplasmic reticulum	36.44	47.4
Bra018066.1-P	Field mustard	endoplasmic reticulum	38.44	47.01
Bra019982.1-P	Field mustard	extracellular, golgi	46.22	46.95
Bra025046.1-P	Field mustard	endoplasmic reticulum, extracellular	35.78	46.8
Bra033148.1-P	Field mustard	extracellular	38.44	46.63
Bra033146.1-P	Field mustard	vacuole	38.0	45.84
Bra024736.1-P	Field mustard	endoplasmic reticulum, extracellular	37.33	45.16

Protein Annotations

Gene3D:3.10.20.500	Gene3D:3.90.70.10	MapMan:50.3.4	EnsemblPlantsGene:Bra022418	EnsemblPlants:Bra022418.1	EnsemblPlants:Bra022418.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	InterPro:Granulin	InterPro:Granulin_sf	InterPro:IPR037277
UniProt:M4E0X1	PFAM:PF00112	PFAM:PF00396	PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139
ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF352	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS
InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00277
SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SUPFAM:SSF57277	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002547E99	SEG:seg	:	:	:	:

Description

AT3G19390 (E=4e-215) | cysteine proteinase, putative / thiol protease, putative

Coordinates

chrA05:-:17821399..17823209

Molecular Weight (calculated)

49022.7 Da

IEP (calculated)

5.555

GRAVY (calculated)

-0.392

Length

450 amino acids

Sequence
(BLAST)

001: MSTPIKFTTL ALVTLSVLLA SSSLGVVTAK KDHRNSEEVK MFERWLVENH KNYNGLGEKD KRFEIFMDNV KFVQEHNSVP NQSYELGLTR FADLTNEEFR
101: AIYLRSKMER TRDSVKSERY LHNVGDKLPD EVDWRAKGAV VPVKDQGSCG SCWAFSAIGA VEGINQIKTG ELVSLSEQEL VDCDTSYNNG CGGGLMDYAF
201: QFIISNGGID TEEDYPYTAT DDNICNTDKK NTRVVTIDGY EDVPENENSL KKALANQPIS VAIEAGGRAF QLYKSGVFTG TCGTALDHGV VAVGYGTSEG
301: QDYWIIRNSW GSNWGESGYI KLERNIKDSS GKCGVAMMAS YPTKSSGSNP PKPPPPAPVV CDKSYNCPAK STCCCLYEYK GKCYSWGCCP LESATCCEDG
401: SSCCPQAYPV CDLKAGTCRM KANSPLSVKA LTRGPATATT KATNVLVSSA

Best Arabidopsis Sequence Match ( AT3G19390.1 )
(BLAST)

001: MATSIKSITL ALLIFSVLLI SLSLGSVTAT ETTRNEAEAR RMYERWLVEN RKNYNGLGEK ERRFEIFKDN LKFVEEHSSI PNRTYEVGLT RFADLTNDEF
101: RAIYLRSKME RTRVPVKGEK YLYKVGDSLP DAIDWRAKGA VNPVKDQGSC GSCWAFSAIG AVEGINQIKT GELISLSEQE LVDCDTSYND GCGGGLMDYA
201: FKFIIENGGI DTEEDYPYIA TDVNVCNSDK KNTRVVTIDG YEDVPQNDEK SLKKALANQP ISVAIEAGGR AFQLYTSGVF TGTCGTSLDH GVVAVGYGSE
301: GGQDYWIVRN SWGSNWGESG YFKLERNIKE SSGKCGVAMM ASYPTKSSGS NPPKPPAPSP VVCDKSNTCP AKSTCCCLYE YNGKCYSWGC CPYESATCCD
401: DGSSCCPQSY PVCDLKANTC RMKGNSPLSI KALTRGPAIA TTKSTNMLVG SA

Arabidopsis Description

RD21CProbable cysteine protease RD21C [Source:UniProtKB/Swiss-Prot;Acc:Q9LT78]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.