Factsheet for Bra021998.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002567.1-P
Bra022051.1-P
Bra022079.1-P
Bra022080.1-P
Bra022083.1-P
Bra022085.2-P
Bra024930.1-P
Bra024932.1-P
Bra024976.1-P
Bra034108.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45890.1	Bra002567.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra022051.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra022079.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra022080.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra022083.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra022085.2-P	AT5G47590.1	21798944
AT5G45890.1	Bra024930.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra024932.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra024976.1-P	AT5G47590.1	21798944
AT5G45890.1	Bra034108.1-P	AT5G47590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50483	Canola	endoplasmic reticulum	100.0	100.0
AT5G45890.1	Thale cress	endoplasmic reticulum, golgi	85.84	85.84
Bra025046.1-P	Field mustard	endoplasmic reticulum, extracellular	76.01	76.45
PGSC0003DMT400026448	Potato	endoplasmic reticulum, extracellular, vacuole	56.07	55.91
Solyc02g076910.2.1	Tomato	extracellular, golgi	56.36	55.56
TraesCS5A01G391500.1	Wheat	endoplasmic reticulum, extracellular	53.47	53.47
TraesCS5D01G401300.1	Wheat	extracellular	53.18	53.33
HORVU5Hr1G095580.1	Barley	endoplasmic reticulum, extracellular	53.18	52.72
EER93437	Sorghum	endoplasmic reticulum	50.58	49.58
Zm00001d013261_P001	Maize	extracellular	47.98	48.68
Bra011608.1-P	Field mustard	endoplasmic reticulum	48.84	47.47
Bra000615.1-P	Field mustard	endoplasmic reticulum	48.55	46.54
Bra018067.1-P	Field mustard	endoplasmic reticulum	47.98	46.24
Bra012252.1-P	Field mustard	endoplasmic reticulum	45.38	44.6
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	45.66	44.13
Bra010592.1-P	Field mustard	extracellular, golgi, vacuole	46.53	43.05
Bra018066.1-P	Field mustard	endoplasmic reticulum	45.09	42.39
Bra011746.1-P	Field mustard	vacuole	45.38	41.98
Bra013705.1-P	Field mustard	extracellular	38.73	40.85
Bra033146.1-P	Field mustard	vacuole	39.88	37.0
Bra022418.1-P	Field mustard	endoplasmic reticulum	47.4	36.44
Bra033148.1-P	Field mustard	extracellular	38.73	36.12
Bra024736.1-P	Field mustard	endoplasmic reticulum, extracellular	38.44	35.75
Bra014057.1-P	Field mustard	endoplasmic reticulum	46.82	35.29
Bra040749.1-P	Field mustard	endoplasmic reticulum	46.53	35.23
Bra038208.1-P	Field mustard	endoplasmic reticulum	44.8	35.15
Bra033657.1-P	Field mustard	extracellular	46.53	35.0
Bra038206.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.8	34.44
Bra019982.1-P	Field mustard	extracellular, golgi	42.49	33.18

Protein Annotations

MapMan:19.4.1.1	Gene3D:3.90.70.10	EnsemblPlantsGene:Bra021998	EnsemblPlants:Bra021998.1	EnsemblPlants:Bra021998.1-P	MEROPS:C01.117
GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	UniProt:M4DZQ1	PFAM:PF00112	PFAM:PF08246
PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF297
InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	UniParc:UPI0002545B6C

Description

AT5G45890 (E=2e-179) SAG12 | SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase

Coordinates

chrA02:+:18340945..18342996

Molecular Weight (calculated)

38019.0 Da

IEP (calculated)

7.376

GRAVY (calculated)

-0.302

Length

346 amino acids

Sequence
(BLAST)

001: MALEHIKIFL IVSLVSSFCF STTLSRLLDD ELIMQKKHDE WMAEHGRTYA DMNEKNSRYV VFKRNVERIE RLNNVPAGRT FKLAVNQFAD LTNDEFRSMY
101: TGYKGDSVLS SQSQTKSTSF RYQNVSSGAL PIAVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ QLVDCDTNDF GCSGGLMDTA
201: FEHIMATGGL TTESNYPYKG EDATCKIKST KPSAASITGY EDVPVNDENA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAVGYSQSS
301: AGSKYWIIKN SWGTKWGEGG YMRIKKDIKD KEGLCGLAMK ASYPTI

Best Arabidopsis Sequence Match ( AT5G45890.1 )
(BLAST)

001: MALKHMQIFL FVAIFSSFCF SITLSRPLDN ELIMQKRHIE WMTKHGRVYA DVKEENNRYV VFKNNVERIE HLNSIPAGRT FKLAVNQFAD LTNDEFRSMY
101: TGFKGVSALS SQSQTKMSPF RYQNVSSGAL PVSVDWRKKG AVTPIKNQGS CGCCWAFSAV AAIEGATQIK KGKLISLSEQ QLVDCDTNDF GCEGGLMDTA
201: FEHIKATGGL TTESNYPYKG EDATCNSKKT NPKATSITGY EDVPVNDEQA LMKAVAHQPV SVGIEGGGFD FQFYSSGVFT GECTTYLDHA VTAIGYGEST
301: NGSKYWIIKN SWGTKWGESG YMRIQKDVKD KQGLCGLAMK ASYPTI

Arabidopsis Description

SAG12Senescence-specific cysteine protease SAG12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ47]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.