Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra039126.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20850.1 | Bra039126.1-P | AT3G01340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96617 | Canola | endoplasmic reticulum | 91.06 | 99.69 |
| Bra012252.1-P | Field mustard | endoplasmic reticulum | 93.02 | 94.6 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 93.02 | 93.54 |
| KRH60879 | Soybean | endoplasmic reticulum | 74.3 | 76.22 |
| KRH51560 | Soybean | endoplasmic reticulum | 74.3 | 76.0 |
| KRH60878 | Soybean | endoplasmic reticulum | 74.02 | 75.93 |
| KRH51561 | Soybean | endoplasmic reticulum | 74.02 | 75.71 |
| VIT_18s0122g00790.t01 | Wine grape | nucleus | 70.95 | 75.6 |
| Solyc04g082710.2.1 | Tomato | cytosol | 63.97 | 75.08 |
| Solyc12g094700.1.1 | Tomato | extracellular | 67.6 | 73.11 |
| PGSC0003DMT400025691 | Potato | endoplasmic reticulum, extracellular | 71.23 | 71.63 |
| Bra011608.1-P | Field mustard | endoplasmic reticulum | 70.39 | 70.79 |
| PGSC0003DMT400075600 | Potato | vacuole | 68.72 | 70.49 |
| TraesCS1B01G033200.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 67.88 | 69.03 |
| TraesCS1D01G026500.1 | Wheat | endoplasmic reticulum | 67.6 | 68.95 |
| TraesCS1A01G027300.1 | Wheat | endoplasmic reticulum | 67.32 | 68.66 |
| TraesCS5D01G152400.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 67.6 | 67.98 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 66.76 | 67.71 |
| TraesCS5B01G138300.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 67.32 | 67.7 |
| Os05t0108600-01 | Rice | extracellular | 67.32 | 67.32 |
| Os01t0971400-01 | Rice | extracellular | 67.04 | 65.75 |
| KXG21060 | Sorghum | endoplasmic reticulum, golgi, vacuole | 67.6 | 65.23 |
| EES02142 | Sorghum | vacuole | 67.88 | 64.29 |
| TraesCS5A01G138700.1 | Wheat | plastid | 67.6 | 64.19 |
| Zm00001d011787_P001 | Maize | extracellular | 68.16 | 63.38 |
| Zm00001d035689_P001 | Maize | extracellular | 65.92 | 62.6 |
| Os02t0715000-01 | Rice | endoplasmic reticulum | 56.98 | 55.74 |
| EES07368 | Sorghum | extracellular | 55.03 | 55.34 |
| TraesCS6A01G279500.1 | Wheat | endoplasmic reticulum, extracellular | 55.31 | 55.0 |
| TraesCS6B01G308300.1 | Wheat | extracellular, vacuole | 55.03 | 54.87 |
| Zm00001d017834_P001 | Maize | extracellular | 47.21 | 54.34 |
| HORVU6Hr1G070320.2 | Barley | endoplasmic reticulum, extracellular | 55.03 | 54.12 |
| HORVU1Hr1G003940.6 | Barley | endoplasmic reticulum | 55.03 | 53.39 |
| TraesCS6D01G259900.1 | Wheat | plastid | 55.31 | 52.38 |
| Bra000615.1-P | Field mustard | endoplasmic reticulum | 51.12 | 50.69 |
| Bra018067.1-P | Field mustard | endoplasmic reticulum | 49.72 | 49.58 |
| Bra013705.1-P | Field mustard | extracellular | 43.3 | 47.26 |
| Bra025046.1-P | Field mustard | endoplasmic reticulum, extracellular | 44.41 | 46.22 |
| Bra018066.1-P | Field mustard | endoplasmic reticulum | 47.49 | 46.2 |
| Bra021998.1-P | Field mustard | endoplasmic reticulum | 44.13 | 45.66 |
| Bra033146.1-P | Field mustard | vacuole | 47.21 | 45.31 |
| Bra033148.1-P | Field mustard | extracellular | 46.93 | 45.28 |
| Bra011746.1-P | Field mustard | vacuole | 47.21 | 45.19 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 46.93 | 44.92 |
| Bra024736.1-P | Field mustard | endoplasmic reticulum, extracellular | 46.37 | 44.62 |
| Bra040749.1-P | Field mustard | endoplasmic reticulum | 52.23 | 40.92 |
| Bra033657.1-P | Field mustard | extracellular | 52.23 | 40.65 |
| Bra022418.1-P | Field mustard | endoplasmic reticulum | 49.72 | 39.56 |
| Bra014057.1-P | Field mustard | endoplasmic reticulum | 50.28 | 39.22 |
| Bra038208.1-P | Field mustard | endoplasmic reticulum | 47.49 | 38.55 |
| Bra019982.1-P | Field mustard | extracellular, golgi | 47.49 | 38.37 |
| Bra038206.1-P | Field mustard | extracellular, plasma membrane, vacuole | 47.49 | 37.78 |
Protein Annotations
| MapMan:19.4.1.1 | MapMan:27.2.10 | Gene3D:3.90.70.10 | EnsemblPlantsGene:Bra016447 | EnsemblPlants:Bra016447.1 | EnsemblPlants:Bra016447.1-P |
| MEROPS:C01.120 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | UniProt:M4DIX0 | PFAM:PF00112 |
| PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 |
| PANTHER:PTHR12411:SF357 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A |
| InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM |
| UniParc:UPI000254698D | SEG:seg | : | : | : | : |
Description
AT1G20850 (E=1e-187) XCP2 | XCP2 (xylem cysteine peptidase 2); cysteine-type peptidase/ peptidase
Coordinates
chrA08:-:18519895..18521135
Molecular Weight (calculated)
39980.8 Da
IEP (calculated)
4.998
GRAVY (calculated)
-0.496
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSSPTRIL CFALALSAAS LSLSFAASND FSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKLH RFEVFKDNLK HIDETNKKVK SYWLGLNEFA
101: DLSHEEFKNK YLGLKTDIAR RQDERSYQEF AYKDVDVEAL PKSVDWRKKG AVSYVKNQGS CGSCWAFSTV AAVEGINKIV TGNLTTLSEQ ELIDCDTTYN
201: NGCNGGLMDY AFEYIVKNGG LRKEEDYPYS MEEGTCETQK DESEMVTISG HQDVPRNDEK SLLKALAHQP LSVAIDASGR EFQFYSGGVF DGRCGVDLDH
301: GVAAVGYGSS KGSDYIIVKN SWGPTWGEKG YIRMKRNTGK PEGLCGINKM ASFPTKTK
101: DLSHEEFKNK YLGLKTDIAR RQDERSYQEF AYKDVDVEAL PKSVDWRKKG AVSYVKNQGS CGSCWAFSTV AAVEGINKIV TGNLTTLSEQ ELIDCDTTYN
201: NGCNGGLMDY AFEYIVKNGG LRKEEDYPYS MEEGTCETQK DESEMVTISG HQDVPRNDEK SLLKALAHQP LSVAIDASGR EFQFYSGGVF DGRCGVDLDH
301: GVAAVGYGSS KGSDYIIVKN SWGPTWGEKG YIRMKRNTGK PEGLCGINKM ASFPTKTK
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.