Factsheet for Os01t0971400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

extracellular: 18372294

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0135800-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20850.1	Os02t0135800-02	AT3G01340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0108600-01	Rice	extracellular	76.44	77.93
EES02142	Sorghum	vacuole	75.89	73.28
Zm00001d011787_P001	Maize	extracellular	76.16	72.21
GSMUA_Achr2P04950_001	Banana	endoplasmic reticulum, golgi	68.77	71.92
Solyc04g082710.2.1	Tomato	cytosol	58.08	69.51
VIT_18s0122g00790.t01	Wine grape	nucleus	63.84	69.35
KRH60879	Soybean	endoplasmic reticulum	65.48	68.48
KRH60878	Soybean	endoplasmic reticulum	65.48	68.48
VIT_03s0038g04000.t01	Wine grape	vacuole	65.48	67.9
GSMUA_Achr3P03740_001	Banana	endoplasmic reticulum	65.48	67.71
CDY01351	Canola	endoplasmic reticulum	64.93	67.52
KRH51560	Soybean	endoplasmic reticulum	64.38	67.14
KRH51561	Soybean	endoplasmic reticulum	64.38	67.14
CDY31861	Canola	endoplasmic reticulum	64.93	67.14
Bra012252.1-P	Field mustard	endoplasmic reticulum	64.66	67.05
Bra016447.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	65.75	67.04
Solyc12g094700.1.1	Tomato	extracellular	60.55	66.77
AT1G20850.1	Thale cress	endoplasmic reticulum	64.38	66.01
CDY33651	Canola	endoplasmic reticulum	58.36	65.34
CDX75496	Canola	endoplasmic reticulum	63.56	65.17
CDX96617	Canola	endoplasmic reticulum	58.36	65.14
Bra011608.1-P	Field mustard	endoplasmic reticulum	63.29	64.89
AT4G35350.1	Thale cress	endoplasmic reticulum	63.01	64.79
PGSC0003DMT400025691	Potato	endoplasmic reticulum, extracellular	62.74	64.33
PGSC0003DMT400075600	Potato	vacuole	61.37	64.18
CDX69132	Canola	plastid	63.56	61.05
GSMUA_Achr3P11680_001	Banana	endoplasmic reticulum, vacuole	63.56	59.34
Os02t0715000-01	Rice	endoplasmic reticulum	57.53	57.38
CDY31498	Canola	cytosol	44.93	54.85
Os08t0556900-01	Rice	extracellular	51.51	48.83
Os11t0255300-01	Rice	extracellular	49.86	48.15
Os01t0907600-01	Rice	extracellular	48.77	47.98
Os04t0208200-01	Rice	extracellular	45.75	47.85
Os04t0206300-00	Rice	extracellular	44.11	47.49
Os12t0273800-00	Rice	extracellular	44.66	46.57
Os04t0670500-01	Rice	extracellular	48.77	36.33
Os05t0508300-01	Rice	plasma membrane	43.84	35.56
Os04t0670200-02	Rice	extracellular	47.67	35.37

Protein Annotations

MapMan:19.4.1.1	MapMan:27.2.10	Gene3D:3.90.70.10	EntrezGene:4323845	EMBL:AK059528	EMBL:AK105881
EMBL:AK106011	EMBL:AK119182	ProteinID:BAB63672.1	ProteinID:BAF07447.2	ProteinID:BAS76429.1	ProteinID:EAZ14987.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004197	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005764	GO:GO:0005773	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EnsemblPlantsGene:Os01g0971400	EnsemblPlants:Os01t0971400-01	PFAM:PF00112
PFAM:PF08246	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411
PANTHER:PTHR12411:SF357	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	UniProt:Q94DH7	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A60E9	RefSeq:XP_015640714.1	SEG:seg	:

Description

Similar to Cysteine proteinase. (Os01t0971400-01)

Coordinates

chr1:+:42855657..42857462

Molecular Weight (calculated)

39929.9 Da

IEP (calculated)

5.061

GRAVY (calculated)

-0.359

Length

365 amino acids

Sequence
(BLAST)

001: MAASMNSKLP LALVLLLLCG GACVAVAMPS ELSIVGYSEE DLASHERLME LFEKFMAKYR KAYSSLEEKL RRFEVFKDNL NHIDEENKKI TGYWLGLNEF
101: ADLTHDEFKA AYLGLTLTPA RRNSNDQLFR YEEVEAASLP KEVDWRKKGA VTEVKNQGQC GSCWAFSTVA AVEGINAIVT GNLTRLSEQE LIDCDTDGNN
201: GCSGGLMDYA FSYIAANGGL HTEESYPYLM EEGTCRRGST EGDDDGEAAA AVTISGYEDV PRNNEQALLK ALAHQPVSVA IEASGRNFQF YSGGVFDGPC
301: GTRLDHGVTA VGYGTASKGH DYIIVKNSWG SHWGEKGYIR MRRGTGKHDG LCGINKMASY PTKNA

Best Arabidopsis Sequence Match ( AT1G20850.1 )
(BLAST)

001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK

Arabidopsis Description

XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.