Factsheet for VIT_03s0038g04000.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g00790.t01	Wine grape	nucleus	76.42	80.06
Solyc04g082710.2.1	Tomato	cytosol	65.91	76.07
Solyc12g094700.1.1	Tomato	extracellular	71.02	75.53
PGSC0003DMT400025691	Potato	endoplasmic reticulum, extracellular	76.14	75.28
PGSC0003DMT400075600	Potato	vacuole	73.86	74.5
TraesCS1D01G026500.1	Wheat	endoplasmic reticulum	70.45	70.66
TraesCS1A01G027300.1	Wheat	endoplasmic reticulum	70.45	70.66
TraesCS1B01G033200.1	Wheat	endoplasmic reticulum, extracellular, golgi	70.45	70.45
GSMUA_Achr3P03740_001	Banana	endoplasmic reticulum	69.32	69.12
TraesCS5D01G152400.1	Wheat	endoplasmic reticulum, golgi, vacuole	68.75	67.98
TraesCS5B01G138300.1	Wheat	endoplasmic reticulum, golgi, vacuole	68.18	67.42
KXG21060	Sorghum	endoplasmic reticulum, golgi, vacuole	71.02	67.39
Os05t0108600-01	Rice	extracellular	68.47	67.32
Os01t0971400-01	Rice	extracellular	67.9	65.48
EES02142	Sorghum	vacuole	69.32	64.55
Zm00001d035689_P001	Maize	extracellular	68.75	64.19
TraesCS5A01G138700.1	Wheat	plastid	68.47	63.93
Zm00001d011787_P001	Maize	extracellular	69.32	63.38
EES07368	Sorghum	extracellular	59.38	58.71
TraesCS6B01G308300.1	Wheat	extracellular, vacuole	59.66	58.5
TraesCS6A01G279500.1	Wheat	endoplasmic reticulum, extracellular	59.66	58.33
Zm00001d017834_P001	Maize	extracellular	50.85	57.56
Os02t0715000-01	Rice	endoplasmic reticulum	59.66	57.38
HORVU6Hr1G070320.2	Barley	endoplasmic reticulum, extracellular	59.09	57.14
TraesCS6D01G259900.1	Wheat	plastid	58.81	54.76
VIT_12s0028g02250.t01	Wine grape	cytosol	45.74	54.21
HORVU1Hr1G003940.6	Barley	endoplasmic reticulum	56.82	54.2
VIT_07s0031g00050.t01	Wine grape	nucleus	50.28	53.64
VIT_12s0028g02270.t01	Wine grape	endoplasmic reticulum, extracellular	50.0	51.61
VIT_10s0003g01100.t01	Wine grape	extracellular	49.72	51.47
VIT_12s0028g02300.t01	Wine grape	endoplasmic reticulum, extracellular	49.15	50.73
VIT_12s0028g02290.t01	Wine grape	endoplasmic reticulum, extracellular	48.86	50.44
VIT_12s0028g02260.t01	Wine grape	endoplasmic reticulum, extracellular	45.74	50.0
VIT_01s0137g00330.t01	Wine grape	endoplasmic reticulum	50.0	49.03
VIT_17s0000g09770.t01	Wine grape	endoplasmic reticulum	49.72	48.61
VIT_18s0001g09990.t01	Wine grape	endoplasmic reticulum	57.1	43.04
VIT_03s0180g00010.t01	Wine grape	extracellular	51.42	42.49
VIT_18s0001g13270.t01	Wine grape	extracellular	44.89	36.24

Protein Annotations

EntrezGene:100248746	wikigene:100248746	EntrezGene:104877917	MapMan:19.4.1.1	MapMan:27.2.10	Gene3D:3.90.70.10
ProteinID:CCB60521	ProteinID:CCB60521.1	UniProt:F6I0Q5	EMBL:FN596508	GO:GO:0003674	GO:GO:0003824
GO:GO:0004197	GO:GO:0005575	GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005764	GO:GO:0005773	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0051603	EntrezGene:LOC100248746	wikigene:LOC100248746	PFAM:PF00112	PFAM:PF08246	PRINTS:PR00705
ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF357	InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29
SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM	TIGR:TC68773	UniParc:UPI00015C8CD9
ArrayExpress:VIT_03s0038g04000	EnsemblPlantsGene:VIT_03s0038g04000	EnsemblPlants:VIT_03s0038g04000.t01	unigene:Vvi.15985	RefSeq:XP_002279940	RefSeq:XP_002279940.1
RefSeq:XP_010645699.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:+:2911405..2912919

Molecular Weight (calculated)

39185.0 Da

IEP (calculated)

4.834

GRAVY (calculated)

-0.375

Length

352 amino acids

Sequence
(BLAST)

001: MALLSSFSKV SILALSLSLL AFSSLARDFS IVGYSPEDLT CIDKLIARFE SWVSKHGKVY KSMEEKLHRF EVFRENLNHI DERNKEVSSY WLGLNEFADL
101: SHEEFKSKYL GLRAEFPRSR DYSGEFRYRD VADLPESVDW RKKGAVTHVK NQGACGSCWA FSTVAAVEGI NQIVTGNLTT LSEQELIDCD TTFNSGCNGG
201: LMDYAFAFIA SNGGLHKEDD YPYLMEEGTC EEQKEDVDIV TISGYEDVPE KDEESLLKAL AHQPLSVAIE ASGRDFQFYS GGVFNGPCGT ELDHGVAAVG
301: YGSSKGLDYI IVKNSWGPKW GEKGYIRMKR NTGKTEGLCG INKMASYPTK DN

Best Arabidopsis Sequence Match ( AT4G35350.1 )
(BLAST)

001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK

Arabidopsis Description

XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.