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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • nucleus 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G044200.1
TraesCS1B01G057100.1
TraesCS1D01G044700.1
TraesCS3B01G162400.1
TraesCS3D01G145000.1
TraesCS5A01G485600.1
TraesCS5B01G499200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20850.1 TraesCS1A01G044200.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS1B01G057100.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS1D01G044700.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS3B01G162400.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS3D01G145000.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS5A01G485600.1 AT3G01340.1 21798944
AT1G20850.1 TraesCS5B01G499200.1 AT3G01340.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G279500.1 Wheat endoplasmic reticulum, extracellular 88.62 93.06
TraesCS6B01G308300.1 Wheat extracellular, vacuole 86.77 91.36
HORVU6Hr1G070320.2 Barley endoplasmic reticulum, extracellular 87.04 90.38
Os02t0715000-01 Rice endoplasmic reticulum 71.96 74.32
EES07368 Sorghum extracellular 69.05 73.31
Zm00001d017834_P001 Maize extracellular 57.67 70.1
GSMUA_Achr2P04950_001 Banana endoplasmic reticulum, golgi 57.41 62.18
Solyc04g082710.2.1 Tomato cytosol 48.94 60.66
VIT_18s0122g00790.t01 Wine grape nucleus 52.65 59.23
GSMUA_Achr3P03740_001 Banana endoplasmic reticulum 55.29 59.21
VIT_03s0038g04000.t01 Wine grape vacuole 54.76 58.81
Solyc12g094700.1.1 Tomato extracellular 51.32 58.61
AT4G35350.1 Thale cress endoplasmic reticulum 55.03 58.59
Bra011608.1-P Field mustard endoplasmic reticulum 54.5 57.87
CDX75496 Canola endoplasmic reticulum 54.23 57.58
PGSC0003DMT400075600 Potato vacuole 52.38 56.73
TraesCS1D01G026500.1 Wheat endoplasmic reticulum 52.38 56.41
KRH51560 Soybean endoplasmic reticulum 52.12 56.29
KRH60879 Soybean endoplasmic reticulum 51.85 56.16
KRH51561 Soybean endoplasmic reticulum 51.85 56.0
CDY01351 Canola endoplasmic reticulum 51.85 55.84
AT1G20850.1 Thale cress endoplasmic reticulum 52.38 55.62
KRH60878 Soybean endoplasmic reticulum 51.32 55.59
TraesCS5D01G152400.1 Wheat endoplasmic reticulum, golgi, vacuole 52.12 55.34
Bra016447.1-P Field mustard endoplasmic reticulum, golgi, vacuole 52.38 55.31
CDY31861 Canola endoplasmic reticulum 51.59 55.24
Bra012252.1-P Field mustard endoplasmic reticulum 51.32 55.11
PGSC0003DMT400025691 Potato endoplasmic reticulum, extracellular 51.59 54.78
CDX69132 Canola plastid 55.03 54.74
CDY33651 Canola endoplasmic reticulum 46.83 54.29
CDX96617 Canola endoplasmic reticulum 46.56 53.82
GSMUA_Achr3P11680_001 Banana endoplasmic reticulum, vacuole 53.17 51.41
TraesCS6D01G144100.1 Wheat cytosol 38.89 48.68
CDY31498 Canola cytosol 37.83 47.83
TraesCS5D01G076500.1 Wheat endoplasmic reticulum, extracellular 41.8 47.02
TraesCS6D01G144000.1 Wheat endoplasmic reticulum, extracellular 40.74 45.03
TraesCS4D01G036700.1 Wheat extracellular 39.68 43.99
TraesCS5D01G401300.1 Wheat extracellular 39.95 43.77
TraesCS4D01G037300.1 Wheat extracellular 39.15 43.4
TraesCS1D01G225100.1 Wheat extracellular 38.89 43.36
TraesCS4D01G036600.1 Wheat extracellular 30.42 43.23
TraesCS4D01G037200.1 Wheat extracellular 38.89 43.11
TraesCS6D01G329900.1 Wheat extracellular 38.62 43.07
TraesCS4D01G037100.1 Wheat extracellular 38.62 42.82
TraesCS4D01G037500.1 Wheat extracellular 38.62 42.82
TraesCS4D01G037000.1 Wheat extracellular 38.62 42.82
TraesCS4D01G036900.1 Wheat extracellular 38.62 42.82
TraesCS6D01G329500.1 Wheat extracellular 38.36 42.77
TraesCS6D01G329600.1 Wheat extracellular 38.36 42.77
TraesCS7D01G471400.1 Wheat extracellular 38.36 42.65
TraesCS3D01G340500.1 Wheat endoplasmic reticulum 41.01 42.58
TraesCS6D01G328500.1 Wheat extracellular 38.1 42.48
TraesCS6D01G328000.1 Wheat extracellular 37.83 42.18
TraesCS6D01G328100.1 Wheat extracellular 37.83 42.18
TraesCS6D01G328300.1 Wheat extracellular 37.83 42.18
TraesCS4D01G037400.1 Wheat extracellular 36.51 42.07
TraesCS7D01G220000.1 Wheat extracellular 37.83 42.06
TraesCS4D01G074800.1 Wheat endoplasmic reticulum 41.27 41.94
TraesCS6D01G329400.1 Wheat extracellular 35.98 41.59
TraesCS6D01G328600.1 Wheat extracellular 37.04 41.3
TraesCS3D01G407600.1 Wheat endoplasmic reticulum 41.01 41.11
TraesCS3D01G407700.1 Wheat endoplasmic reticulum 40.21 40.53
TraesCS2D01G547600.1 Wheat cytosol, mitochondrion, nucleus, plastid 39.15 40.22
TraesCS3D01G342100.2 Wheat endoplasmic reticulum 40.48 38.73
TraesCS2D01G513600.1 Wheat endoplasmic reticulum, golgi, vacuole 42.86 34.99
TraesCS2D01G547800.1 Wheat endoplasmic reticulum, extracellular 42.86 34.62
TraesCS6D01G329300.1 Wheat extracellular 28.84 34.28
TraesCS2D01G546600.1 Wheat plasma membrane, vacuole 41.8 33.26
TraesCS5D01G149800.1 Wheat endoplasmic reticulum 40.21 32.48
TraesCS4D01G036800.1 Wheat extracellular 12.43 31.76
TraesCS7D01G265100.1 Wheat cytosol, nucleus, plastid 21.43 31.4
TraesCS1D01G327000.1 Wheat extracellular 37.57 31.28
TraesCS2D01G053700.1 Wheat extracellular 7.14 22.13
Protein Annotations
MapMan:27.2.10Gene3D:3.90.70.10GO:GO:0003674GO:GO:0003824GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0008234GO:GO:0016787GO:GO:0019538PFAM:PF00112PFAM:PF08246
PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF357
InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848SUPFAM:SSF54001EnsemblPlantsGene:TraesCS6D01G259900EnsemblPlants:TraesCS6D01G259900.1
TIGR:cd02248SEG:seg::::
Description
No Description!
Coordinates
chr6D:+:366539703..366541383
Molecular Weight (calculated)
41298.6 Da
IEP (calculated)
7.534
GRAVY (calculated)
-0.378
Length
378 amino acids
Sequence
(BLAST)
001: MSKSIPARLK PHLPPHKSSA TRVISVFAAC CCSSSSATYH HDPAVVGYSQ EDVALPSRIL ELFSSWSVKH SKVYVTPKEK VRRYEVFRQN LKHIVETNRR
101: NGSYWLGLNQ FADVAHEEFK AGYLGLSTGL AGAGGRPRAP TTAFRYEAAV DLPWEVDWRK KGAVTPVKNQ GRCGSCWAFS TVAAVEGINQ MVTGRLESLS
201: EQELMDCDST LDHGCGGGLM DFAYAYIVGN QGIHTDADYP YLMEEGDCKE KQPHSKVVTI SGYEDVPENS EVSLLKALAH QPVSVGIAAG SRDFQFYKGG
301: VFEGTCGTQL DHALTAVGYG SSNGHDYIVM KNSWGGGWGE QGYFRIKRGT GRPEGVCDIY RIASYPTKNN GTGWGWGA
Best Arabidopsis Sequence Match ( AT1G20850.1 )
(BLAST)
001: MALSSPSRIL CFALALSAAS LSLSFASSHD YSIVGYSPED LESHDKLIEL FENWISNFEK AYETVEEKFL RFEVFKDNLK HIDETNKKGK SYWLGLNEFA
101: DLSHEEFKKM YLGLKTDIVR RDEERSYAEF AYRDVEAVPK SVDWRKKGAV AEVKNQGSCG SCWAFSTVAA VEGINKIVTG NLTTLSEQEL IDCDTTYNNG
201: CNGGLMDYAF EYIVKNGGLR KEEDYPYSME EGTCEMQKDE SETVTINGHQ DVPTNDEKSL LKALAHQPLS VAIDASGREF QFYSGGVFDG RCGVDLDHGV
301: AAVGYGSSKG SDYIIVKNSW GPKWGEKGYI RLKRNTGKPE GLCGINKMAS FPTKTK
Arabidopsis Description
XCP2Cysteine protease XCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM66]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.