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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75496 Canola endoplasmic reticulum 91.58 97.75
AT4G35350.1 Thale cress endoplasmic reticulum 85.53 91.55
CDY01351 Canola endoplasmic reticulum 64.47 69.8
CDX96617 Canola endoplasmic reticulum 59.74 69.42
CDY31861 Canola endoplasmic reticulum 64.47 69.41
CDY33651 Canola endoplasmic reticulum 59.47 69.33
TraesCS1D01G026500.1 Wheat endoplasmic reticulum 62.63 67.81
TraesCS1B01G033200.1 Wheat endoplasmic reticulum, extracellular, golgi 62.63 67.61
TraesCS1A01G027300.1 Wheat endoplasmic reticulum 62.37 67.52
GSMUA_Achr3P03740_001 Banana endoplasmic reticulum 62.11 66.86
TraesCS5B01G138300.1 Wheat endoplasmic reticulum, golgi, vacuole 62.11 66.29
TraesCS5D01G152400.1 Wheat endoplasmic reticulum, golgi, vacuole 62.11 66.29
Os05t0108600-01 Rice extracellular 61.58 65.36
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 62.63 64.15
Os01t0971400-01 Rice extracellular 61.05 63.56
TraesCS5A01G138700.1 Wheat plastid 62.37 62.86
EES02142 Sorghum vacuole 62.37 62.7
Zm00001d011787_P001 Maize extracellular 62.37 61.56
Zm00001d035689_P001 Maize extracellular 60.79 61.27
EES07368 Sorghum extracellular 56.05 59.83
TraesCS6A01G279500.1 Wheat endoplasmic reticulum, extracellular 55.26 58.33
TraesCS6B01G308300.1 Wheat extracellular, vacuole 55.0 58.22
Os02t0715000-01 Rice endoplasmic reticulum 55.79 57.92
HORVU6Hr1G070320.2 Barley endoplasmic reticulum, extracellular 54.74 57.14
Zm00001d017834_P001 Maize extracellular 46.58 56.91
CDY31498 Canola cytosol 43.42 55.18
TraesCS6D01G259900.1 Wheat plastid 54.74 55.03
CDY39574 Canola cytosol, endoplasmic reticulum, nucleus 41.84 54.08
HORVU1Hr1G003940.6 Barley endoplasmic reticulum 51.32 52.85
CDY58055 Canola golgi, nucleus, plastid 43.16 50.93
CDY34045 Canola endoplasmic reticulum 47.37 49.86
CDX83168 Canola endoplasmic reticulum 47.11 49.58
CDY48168 Canola endoplasmic reticulum 46.58 49.3
CDX87758 Canola endoplasmic reticulum 44.74 49.13
CDY50483 Canola endoplasmic reticulum 44.74 49.13
CDY17193 Canola endoplasmic reticulum 41.05 49.06
CDX77621 Canola endoplasmic reticulum, extracellular 44.21 48.98
CDY22445 Canola vacuole 46.32 47.06
CDX75633 Canola vacuole 46.05 46.79
CDX69285 Canola endoplasmic reticulum, vacuole 45.26 45.99
CDY44047 Canola vacuole 46.32 45.83
CDY39575 Canola endoplasmic reticulum 42.89 44.29
CDY37617 Canola endoplasmic reticulum, extracellular 42.37 43.51
CDY25281 Canola extracellular 42.37 43.4
CDY25283 Canola vacuole 41.84 42.63
CDY63262 Canola extracellular, plasma membrane, vacuole 27.11 41.53
CDY06760 Canola endoplasmic reticulum 49.74 41.36
CDY17093 Canola endoplasmic reticulum 49.47 41.14
CDY22370 Canola extracellular 49.47 40.87
CDX71540 Canola extracellular 49.47 40.87
CDY17044 Canola endoplasmic reticulum 49.21 40.74
CDY25228 Canola extracellular 49.21 40.65
CDY63586 Canola endoplasmic reticulum 48.95 40.52
CDY16132 Canola endoplasmic reticulum, extracellular, vacuole 40.26 40.37
CDY46179 Canola endoplasmic reticulum 47.11 39.78
CDX95457 Canola endoplasmic reticulum, extracellular, vacuole 45.79 38.75
CDX94938 Canola extracellular, vacuole 45.0 38.69
CDY50157 Canola endoplasmic reticulum, extracellular, vacuole 45.53 38.53
CDX93470 Canola plasma membrane 44.74 38.37
CDY50154 Canola endoplasmic reticulum 42.89 37.05
CDX95451 Canola endoplasmic reticulum, extracellular, vacuole 42.63 36.82
CDX99227 Canola endoplasmic reticulum 47.11 35.31
CDY27951 Canola endoplasmic reticulum 39.21 32.46
CDY02431 Canola nucleus 36.32 30.73
Protein Annotations
MapMan:19.4.1.1MapMan:27.2.10Gene3D:3.90.70.10GO:A0A078BXP9MEROPS:C01.065EnsemblPlants:CDX69132
ProteinID:CDX69132ProteinID:CDX69132.1GO:GO:0003674GO:GO:0003824GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0008234GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00130919001PFAM:PF00112
PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639PANTHER:PTHR12411PANTHER:PTHR12411:SF357
InterPro:Papain_like_cys_pep_sfInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29
SMART:SM00645SMART:SM00848SUPFAM:SSF54001UniParc:UPI0004EC92A1SEG:seg:
Description
BnaC01g03210D
Coordinates
chrLK031789:+:3103729..3105218
Molecular Weight (calculated)
42069.5 Da
IEP (calculated)
5.448
GRAVY (calculated)
-0.363
Length
380 amino acids
Sequence
(BLAST)
001: MPLLSFHIIS SPSSSSLSET ALAIMAFSTP SSLAKLSLLV AISASALLCS ALARDFSIIG YTPEQLSSTD NLLELFESWM SEHSKAYQSV EEKVHRFEVF
101: RDNLMHIDQR NNEISEYWLG LNEFADLTHE EFKRKYLGLA KPQFSRKRQP SGNFRYRDVT DLPKSVDWRK KGAVTPVKNQ GSCGSCWAFS TVAAVEGIHQ
201: ITTGNLSSLS EQELIDCDTT YNNGCNGGLM DYAFQYIIST GGLHKEDDYP YLMEEGICQE QKEDVEVVTI SGYEDVPQNS DESLVKALAH QPVSVAIEAS
301: GRDFQFYKGG VFNGKCGTEL DHGVAAVGYG SSKGSDYVIV KNSWGPRWGE KGFIRMKRNT GKPEGICGIN KMASYPTKTN
Best Arabidopsis Sequence Match ( AT4G35350.1 )
(BLAST)
001: MAFSAPSLSK FSLLVAISAS ALLCCAFARD FSIVGYTPEH LTNTDKLLEL FESWMSEHSK AYKSVEEKVH RFEVFRENLM HIDQRNNEIN SYWLGLNEFA
101: DLTHEEFKGR YLGLAKPQFS RKRQPSANFR YRDITDLPKS VDWRKKGAVA PVKDQGQCGS CWAFSTVAAV EGINQITTGN LSSLSEQELI DCDTTFNSGC
201: NGGLMDYAFQ YIISTGGLHK EDDYPYLMEE GICQEQKEDV ERVTISGYED VPENDDESLV KALAHQPVSV AIEASGRDFQ FYKGGVFNGK CGTDLDHGVA
301: AVGYGSSKGS DYVIVKNSWG PRWGEKGFIR MKRNTGKPEG LCGINKMASY PTKTK
Arabidopsis Description
XCP1Cysteine protease XCP1 [Source:UniProtKB/Swiss-Prot;Acc:O65493]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.