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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83168 Canola endoplasmic reticulum 97.51 97.51
AT5G50260.1 Thale cress endoplasmic reticulum 89.2 89.2
VIT_17s0000g09770.t01 Wine grape endoplasmic reticulum 70.08 70.28
Solyc03g111730.2.1 Tomato endoplasmic reticulum 69.25 69.44
PGSC0003DMT400039210 Potato endoplasmic reticulum 69.25 69.44
CDY39574 Canola cytosol, endoplasmic reticulum, nucleus 56.51 69.39
KRH54277 Soybean endoplasmic reticulum 69.25 69.06
KRH63669 Soybean endoplasmic reticulum 69.25 69.06
CDY48168 Canola endoplasmic reticulum 65.37 65.74
GSMUA_AchrUn_... Banana endoplasmic reticulum 63.71 64.07
KRH03891 Soybean endoplasmic reticulum 65.37 62.27
CDY39575 Canola endoplasmic reticulum 62.05 60.87
TraesCS4A01G238600.1 Wheat nucleus 59.83 59.34
TraesCS3B01G380400.1 Wheat golgi 59.83 59.34
TraesCS3D01G340500.1 Wheat endoplasmic reticulum 59.83 59.34
TraesCS3A01G346900.1 Wheat endoplasmic reticulum 59.56 59.07
TraesCS3A01G348500.1 Wheat endoplasmic reticulum 59.56 59.07
HORVU3Hr1G088270.2 Barley extracellular 60.11 58.81
GSMUA_Achr10P... Banana endoplasmic reticulum 57.89 58.71
TraesCS3B01G378600.1 Wheat endoplasmic reticulum 59.83 58.54
EES09937 Sorghum endoplasmic reticulum 59.83 58.22
EES15197 Sorghum endoplasmic reticulum 59.83 58.06
HORVU3Hr1G088080.2 Barley endoplasmic reticulum, extracellular 60.11 58.02
TraesCS4D01G074800.1 Wheat endoplasmic reticulum 59.56 57.8
Os08t0556900-01 Rice extracellular 60.66 56.88
Zm00001d031971_P002 Maize endoplasmic reticulum 54.02 56.36
Os11t0255300-01 Rice extracellular 58.45 55.82
EES01927 Sorghum extracellular 56.51 55.28
Zm00001d042446_P001 Maize extracellular 55.68 54.62
Os01t0907600-01 Rice extracellular 55.96 54.45
TraesCS4B01G076200.1 Wheat endoplasmic reticulum 59.83 54.0
TraesCS3D01G407600.1 Wheat endoplasmic reticulum 55.68 53.32
TraesCS3B01G447400.1 Wheat endoplasmic reticulum 55.12 53.21
TraesCS3D01G342100.2 Wheat endoplasmic reticulum 58.17 53.16
HORVU3Hr1G091920.2 Barley endoplasmic reticulum 54.85 53.08
TraesCS3A01G412900.1 Wheat endoplasmic reticulum 55.4 53.05
HORVU3Hr1G091800.1 Barley endoplasmic reticulum 55.68 53.03
Zm00001d012120_P001 Maize endoplasmic reticulum 55.68 53.03
Zm00001d007464_P001 Maize endoplasmic reticulum 56.23 52.86
HORVU3Hr1G091790.1 Barley extracellular 54.57 52.81
EER90747 Sorghum endoplasmic reticulum 55.68 52.76
TraesCS3A01G413000.1 Wheat endoplasmic reticulum 53.19 52.03
CDY01351 Canola endoplasmic reticulum 50.42 51.85
CDY31861 Canola endoplasmic reticulum 50.69 51.84
TraesCS3B01G447500.1 Wheat extracellular, vacuole 53.19 51.75
TraesCS3D01G407700.1 Wheat endoplasmic reticulum 53.46 51.47
TraesCS3A01G413200.1 Wheat endoplasmic reticulum 53.46 51.47
CDY58055 Canola golgi, nucleus, plastid 45.43 50.93
CDX75496 Canola endoplasmic reticulum 49.31 50.0
CDX96617 Canola endoplasmic reticulum 45.15 49.85
CDY33651 Canola endoplasmic reticulum 44.88 49.69
CDY50483 Canola endoplasmic reticulum 46.54 48.55
CDX87758 Canola endoplasmic reticulum 46.26 48.27
CDX69132 Canola plastid 49.86 47.37
CDX77621 Canola endoplasmic reticulum, extracellular 44.88 47.23
CDY17193 Canola endoplasmic reticulum 40.44 45.91
CDY22445 Canola vacuole 45.71 44.12
CDX75633 Canola vacuole 45.15 43.58
CDX69285 Canola endoplasmic reticulum, vacuole 44.88 43.32
CDY44047 Canola vacuole 45.43 42.71
CDY25228 Canola extracellular 51.52 40.43
CDY25283 Canola vacuole 41.55 40.21
CDY37617 Canola endoplasmic reticulum, extracellular 41.0 40.0
CDY22370 Canola extracellular 50.97 40.0
CDX71540 Canola extracellular 50.97 40.0
CDY31498 Canola cytosol 32.96 39.8
CDY25281 Canola extracellular 40.44 39.35
CDY06760 Canola endoplasmic reticulum 49.31 38.95
CDY46179 Canola endoplasmic reticulum 48.2 38.67
CDY63586 Canola endoplasmic reticulum 48.75 38.34
CDY17044 Canola endoplasmic reticulum 48.75 38.34
CDX95457 Canola endoplasmic reticulum, extracellular, vacuole 47.65 38.31
CDY17093 Canola endoplasmic reticulum 48.48 38.29
CDY16132 Canola endoplasmic reticulum, extracellular, vacuole 39.89 37.99
CDY50157 Canola endoplasmic reticulum, extracellular, vacuole 47.09 37.86
CDY63262 Canola extracellular, plasma membrane, vacuole 25.76 37.5
CDX95451 Canola endoplasmic reticulum, extracellular, vacuole 44.04 36.14
CDY50154 Canola endoplasmic reticulum 44.04 36.14
CDX93470 Canola plasma membrane 42.66 34.76
CDX94938 Canola extracellular, vacuole 42.38 34.62
CDX99227 Canola endoplasmic reticulum 48.2 34.32
CDY02431 Canola nucleus 38.78 31.18
CDY27951 Canola endoplasmic reticulum 39.61 31.15
Protein Annotations
MapMan:19.4.1.1Gene3D:3.90.70.10GO:A0A078H673UniProt:A0A078H673MEROPS:C01.A03EnsemblPlants:CDY34045
ProteinID:CDY34045ProteinID:CDY34045.1GO:GO:0003674GO:GO:0003824GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00055918001
PFAM:PF00112PFAM:PF08246PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640
PANTHER:PTHR12411PANTHER:PTHR12411:SF524InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_AS
InterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848SUPFAM:SSF54001
SignalP:SignalP-noTMUniParc:UPI0004EDE388SEG:seg:::
Description
BnaC03g27700DBnaC03g27700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H673]
Coordinates
chrLK032326:-:378437..380354
Molecular Weight (calculated)
40651.7 Da
IEP (calculated)
5.948
GRAVY (calculated)
-0.635
Length
361 amino acids
Sequence
(BLAST)
001: MKRFIVLSLC LLMVLETTKG LDIHDKDVES EDSLWELYER WRSHHTIARS FEEKAKRFNV FKHNVRHIHE TNKKEKPYKL KLNEFGDMTT EEFRRSYAGS
101: NIKHHRMLKG ERRATGKFMY ANVNALPTSV DWRKNGAVTP VKNQGQCGDC WAFSTVVAVE GINQIRTKEL TSLSEQELVD CDTNENQGCS GGLMDLAFEF
201: IKEKGGLTSE LVYPYQASDE TCDKNKENAP VVSIDGHEDV PENSEDDLMK AVANQPVSVA IDAGSSDFQF YSEGVFTGRC GTELNHGVAA VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIHHKEG LCGITMEASY PVKNSNTNPP GPTSTTLKDE L
Best Arabidopsis Sequence Match ( AT5G50260.1 )
(BLAST)
001: MKRFIVLALC MLMVLETTKG LDFHNKDVES ENSLWELYER WRSHHTVARS LEEKAKRFNV FKHNVKHIHE TNKKDKSYKL KLNKFGDMTS EEFRRTYAGS
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
Arabidopsis Description
CEP1KDEL-tailed cysteine endopeptidase CEP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.