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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 8
  • vacuole 6
  • plasma membrane 5
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042446_P001 Maize extracellular 87.93 91.03
EES01927 Sorghum extracellular 87.66 90.51
Os01t0907600-01 Rice extracellular 70.87 72.78
TraesCS3B01G447400.1 Wheat endoplasmic reticulum 69.82 71.12
TraesCS3D01G407600.1 Wheat endoplasmic reticulum 69.03 69.76
TraesCS3A01G412900.1 Wheat endoplasmic reticulum 69.03 69.76
HORVU3Hr1G091800.1 Barley endoplasmic reticulum 69.29 69.66
TraesCS3A01G413000.1 Wheat endoplasmic reticulum 66.93 69.11
TraesCS3B01G447500.1 Wheat extracellular, vacuole 66.67 68.46
TraesCS3A01G413200.1 Wheat endoplasmic reticulum 67.19 68.27
TraesCS3D01G407700.1 Wheat endoplasmic reticulum 66.93 68.0
HORVU3Hr1G091920.2 Barley endoplasmic reticulum 66.14 67.56
HORVU3Hr1G091790.1 Barley extracellular 65.88 67.29
KRH63669 Soybean endoplasmic reticulum 56.43 59.39
KRH54277 Soybean endoplasmic reticulum 56.43 59.39
VIT_17s0000g09770.t01 Wine grape endoplasmic reticulum 55.38 58.61
Solyc05g013920.2.1 Tomato endoplasmic reticulum 54.86 58.38
GSMUA_AchrUn_... Banana endoplasmic reticulum 54.86 58.22
AT5G50260.1 Thale cress endoplasmic reticulum 54.86 57.89
CDY39574 Canola cytosol, endoplasmic reticulum, nucleus 44.62 57.82
PGSC0003DMT400027975 Potato endoplasmic reticulum 54.07 57.7
GSMUA_Achr10P... Banana endoplasmic reticulum 53.54 57.3
Solyc03g111730.2.1 Tomato endoplasmic reticulum 53.81 56.94
PGSC0003DMT400039210 Potato endoplasmic reticulum 53.54 56.67
VIT_01s0137g00330.t01 Wine grape endoplasmic reticulum 53.28 56.55
KRH03891 Soybean endoplasmic reticulum 55.91 56.2
Bra000615.1-P Field mustard endoplasmic reticulum 53.02 55.96
CDX83168 Canola endoplasmic reticulum 52.76 55.68
CDY34045 Canola endoplasmic reticulum 52.76 55.68
EES15197 Sorghum endoplasmic reticulum 54.33 55.65
EES09937 Sorghum endoplasmic reticulum 52.49 53.91
Bra018067.1-P Field mustard endoplasmic reticulum 50.66 53.76
CDY48168 Canola endoplasmic reticulum 50.66 53.76
AT3G48350.1 Thale cress endoplasmic reticulum 50.66 53.02
AT3G48340.1 Thale cress endoplasmic reticulum, extracellular 49.87 52.63
CDY39575 Canola endoplasmic reticulum 49.87 51.63
Bra018066.1-P Field mustard endoplasmic reticulum 49.61 51.36
KXG19777 Sorghum extracellular 43.57 48.82
KXG19778 Sorghum cytosol, nucleus, plastid 39.11 48.38
EER89590 Sorghum extracellular 43.04 48.24
EES10550 Sorghum extracellular 43.04 48.24
KXG19775 Sorghum extracellular 43.04 48.24
KXG20680 Sorghum endoplasmic reticulum, extracellular, vacuole 44.62 47.49
OQU81187 Sorghum endoplasmic reticulum, extracellular 43.04 47.26
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 45.93 47.17
EES02142 Sorghum vacuole 46.72 47.09
EES10461 Sorghum endoplasmic reticulum 41.47 46.75
KXG25862 Sorghum endoplasmic reticulum 41.21 46.59
KXG25863 Sorghum endoplasmic reticulum 41.21 46.59
KXG25861 Sorghum endoplasmic reticulum 41.21 46.59
EER93437 Sorghum endoplasmic reticulum 43.04 46.46
EES10463 Sorghum endoplasmic reticulum 41.21 46.45
OQU81188 Sorghum cytosol, nucleus, plastid 32.55 44.93
EES07368 Sorghum extracellular 41.21 44.1
EER88857 Sorghum endoplasmic reticulum 42.78 43.82
EER88858 Sorghum golgi, vacuole 44.36 42.57
KXG27269 Sorghum endoplasmic reticulum 48.29 39.66
EES13064 Sorghum extracellular, plasma membrane, vacuole 46.46 37.9
EES11628 Sorghum extracellular 45.93 37.16
EES18460 Sorghum endoplasmic reticulum 42.78 35.28
Protein Annotations
Gene3D:3.90.70.10MapMan:50.3.4EntrezGene:8081265UniProt:C5WX88EnsemblPlants:EER90747ProteinID:EER90747
ProteinID:EER90747.1GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575GO:GO:0005576
GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005773
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603PFAM:PF00112PFAM:PF08246
PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF346
InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_C
InterPro:Prot_inhib_I29SMART:SM00645SMART:SM00848EnsemblPlantsGene:SORBI_3001G058800SUPFAM:SSF54001unigene:Sbi.20334
SignalP:SignalP-noTMUniParc:UPI0001A8217CRefSeq:XP_002463749.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:+:4436280..4437820
Molecular Weight (calculated)
41865.2 Da
IEP (calculated)
7.586
GRAVY (calculated)
-0.420
Length
381 amino acids
Sequence
(BLAST)
001: MAQLAKTKTT LLLVALLAVV SAVELCRAIE FDERDLASDE ALWDLYERWQ THHRVHRHHG EKGRRFGTFK ENVRFIHAHN KRGDRPSYRL RLNRFGDMGP
101: EEFRSTFADS RINDLRRYRE SSPAATAVPG FMYDDATDVP RSVDWRQHGA VTAVKNQGRC GSCWAFSTVV AVEGINAIRT GSLVSLSEQE LVDCDTAENG
201: CQGGLMENAF DFIKSYGGIT TESAYPYRAS NGTCDGMRAR RGRVHVSIDG HQMVPTGSED ALAKAVARQP VSVAIDAGGQ AFQFYSEGVF TGDCGTDLDH
301: GVAVVGYGVS DVDGTPYWIV KNSWGPSWGE GGYIRMQRGA GNGGLCGIAM EASFPIKTSH NPARKPRRAL IDLQGHLRSS Q
Best Arabidopsis Sequence Match ( AT5G50260.1 )
(BLAST)
001: MKRFIVLALC MLMVLETTKG LDFHNKDVES ENSLWELYER WRSHHTVARS LEEKAKRFNV FKHNVKHIHE TNKKDKSYKL KLNKFGDMTS EEFRRTYAGS
101: NIKHHRMFQG EKKATKSFMY ANVNTLPTSV DWRKNGAVTP VKNQGQCGSC WAFSTVVAVE GINQIRTKKL TSLSEQELVD CDTNQNQGCN GGLMDLAFEF
201: IKEKGGLTSE LVYPYKASDE TCDTNKENAP VVSIDGHEDV PKNSEDDLMK AVANQPVSVA IDAGGSDFQF YSEGVFTGRC GTELNHGVAV VGYGTTIDGT
301: KYWIVKNSWG EEWGEKGYIR MQRGIRHKEG LCGIAMEASY PLKNSNTNPS RLSLDSLKDE L
Arabidopsis Description
CEP1KDEL-tailed cysteine endopeptidase CEP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGR9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.