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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 2
  • plastid 2
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004364_P001 Maize nucleus 85.87 77.2
KXG25861 Sorghum endoplasmic reticulum 92.39 75.67
KXG25862 Sorghum endoplasmic reticulum 92.39 75.67
KXG25863 Sorghum endoplasmic reticulum 92.39 75.67
EES10463 Sorghum endoplasmic reticulum 90.58 73.96
EES10461 Sorghum endoplasmic reticulum 90.22 73.67
Zm00001d004355_P001 Maize extracellular 88.41 71.14
Zm00001d008796_P001 Maize extracellular 88.04 70.85
KXG19778 Sorghum cytosol, nucleus, plastid 72.83 65.26
EES10550 Sorghum extracellular 73.91 60.0
KXG19775 Sorghum extracellular 73.91 60.0
KXG19777 Sorghum extracellular 73.91 60.0
EER89590 Sorghum extracellular 73.91 60.0
KRH55771 Soybean cytosol, nucleus 55.07 54.29
Os12t0273800-00 Rice extracellular 67.39 53.14
VIT_12s0028g02250.t01 Wine grape cytosol 55.43 51.52
PGSC0003DMT400086163 Potato cytosol 42.03 49.79
VIT_12s0028g02260.t01 Wine grape endoplasmic reticulum, extracellular 57.25 49.07
OQU81187 Sorghum endoplasmic reticulum, extracellular 60.51 48.13
Solyc02g076970.1.1 Tomato extracellular 48.19 47.33
VIT_12s0028g02300.t01 Wine grape endoplasmic reticulum, extracellular 57.97 46.92
KRH55800 Soybean endoplasmic reticulum, golgi 57.97 46.65
KRH55761 Soybean extracellular 57.97 46.65
VIT_12s0028g02290.t01 Wine grape endoplasmic reticulum, extracellular 57.61 46.63
VIT_12s0028g02270.t01 Wine grape endoplasmic reticulum, extracellular 57.61 46.63
KRH55750 Soybean extracellular 57.61 46.36
PGSC0003DMT400012877 Potato endoplasmic reticulum, extracellular, vacuole 56.88 46.18
KRH25765 Soybean endoplasmic reticulum, golgi 57.25 46.06
KRG88601 Soybean endoplasmic reticulum, golgi 57.25 46.06
KRH55801 Soybean golgi, vacuole 57.25 46.06
KRH25728 Soybean extracellular 57.25 46.06
KRH25766 Soybean extracellular 56.88 45.77
KRH55752 Soybean endoplasmic reticulum 56.88 45.77
KRG88605 Soybean endoplasmic reticulum, golgi 56.52 45.48
KRH55762 Soybean endoplasmic reticulum 56.52 45.48
KRH25729 Soybean endoplasmic reticulum, golgi 56.52 45.48
PGSC0003DMT400012881 Potato endoplasmic reticulum 55.8 45.29
VIT_10s0003g01100.t01 Wine grape extracellular 55.43 45.0
Solyc12g056010.1.1 Tomato endoplasmic reticulum 55.43 45.0
Solyc12g056000.1.1 Tomato endoplasmic reticulum 55.43 45.0
PGSC0003DMT400026461 Potato extracellular 55.43 45.0
Solyc12g056020.1.1 Tomato extracellular 55.43 44.87
PGSC0003DMT400012885 Potato extracellular 50.0 44.66
KRH29892 Soybean extracellular, golgi, vacuole 55.43 44.61
PGSC0003DMT400026457 Potato extracellular 50.36 44.27
KRH25039 Soybean extracellular, golgi, vacuole 50.0 44.09
KRH55769 Soybean extracellular, vacuole 55.07 43.18
KRH25038 Soybean extracellular 53.62 43.15
KRH13244 Soybean extracellular 51.09 42.47
EER93437 Sorghum endoplasmic reticulum 51.45 40.23
EES09937 Sorghum endoplasmic reticulum 52.9 39.35
Solyc03g006200.1.1 Tomato endoplasmic reticulum, extracellular 43.12 39.14
EES15197 Sorghum endoplasmic reticulum 49.28 36.56
KXG20680 Sorghum endoplasmic reticulum, extracellular, vacuole 47.1 36.31
EES02142 Sorghum vacuole 48.55 35.45
KXG21060 Sorghum endoplasmic reticulum, golgi, vacuole 47.1 35.04
EES07368 Sorghum extracellular 44.93 34.83
EER88857 Sorghum endoplasmic reticulum 45.65 33.87
EES01927 Sorghum extracellular 44.93 33.6
EER90747 Sorghum endoplasmic reticulum 44.93 32.55
EER88858 Sorghum golgi, vacuole 45.65 31.74
KXG27269 Sorghum endoplasmic reticulum 48.19 28.66
EES13064 Sorghum extracellular, plasma membrane, vacuole 47.83 28.27
EES11628 Sorghum extracellular 46.74 27.39
EES18460 Sorghum endoplasmic reticulum 43.84 26.19
Protein Annotations
Gene3D:3.90.70.10MapMan:50.3.4UniProt:A0A1Z5RBS2GO:GO:0003674GO:GO:0003824GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234GO:GO:0016787GO:GO:0019538
EnsemblPlants:OQU81188ProteinID:OQU81188ProteinID:OQU81188.1PFAM:PF00112PFAM:PF08246PRINTS:PR00705
ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640PANTHER:PTHR12411PANTHER:PTHR12411:SF424InterPro:Papain_like_cys_pep_sf
InterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_ASInterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29
SMART:SM00645EnsemblPlantsGene:SORBI_3006G023000SUPFAM:SSF54001UniParc:UPI0001A86AA5RefSeq:XP_002446130.1:
Description
hypothetical protein
Coordinates
chr6:+:3989166..3991715
Molecular Weight (calculated)
29783.5 Da
IEP (calculated)
6.882
GRAVY (calculated)
-0.296
Length
276 amino acids
Sequence
(BLAST)
001: MKSLTTPLQA TPMVAHYPRD NVAFVESFNA NKNNKFWLGV NQFADLTTEE FKANKGFKPT SAEKVPTTGF KYENLSVSAL PTAVDWRTKG AVTPIKNQGQ
101: CGCCWAFSAV AAMEGIVKLS TGNLISLSKQ ELVDCDTHSM DEGCEVQLPY KAVDGKCKGG SKSAATIKGH EDVPVNNEAA LMKAVANQPV SVAVDASDRT
201: FMLYSGGVMT GSCGTELDHG IAAIGYGMES DGTKYWILKN SWGTTWGEKG FLRMEKDITD KRGMCGLAMK PSYPTE
Best Arabidopsis Sequence Match ( AT2G34080.1 )
(BLAST)
001: MASIMVLVTV LIILFTGFRI SQATSRTVIF REQSMVDKHE QWMARFSREY RDELEKNMRR DVFKKNLKFI ENFNKKGNKS YKLGVNEFAD WTNEEFLAIH
101: TGLKGLTEVS PSKVVAKTIS SQTWNVSDMV VESKDWRAEG AVTPVKYQGQ CGCCWAFSAV AAVEGVAKIA GGNLVSLSEQ QLLDCDREYD RGCDGGIMSD
201: AFNYVVQNRG IASENDYSYQ GSDGGCRSNA RPAARISGFQ TVPSNNERAL LEAVSRQPVS VSMDATGDGF MHYSGGVYDG PCGTSSNHAV TFVGYGTSQD
301: GTKYWLAKNS WGETWGEKGY IRIRRDVAWP QGMCGVAQYA FYPVA
Arabidopsis Description
Cysteine proteinase [Source:UniProtKB/TrEMBL;Acc:O22961]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.