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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50154 Canola endoplasmic reticulum 97.95 97.95
CDX95457 Canola endoplasmic reticulum, extracellular, vacuole 81.82 80.18
CDY50157 Canola endoplasmic reticulum, extracellular, vacuole 81.14 79.51
CDY46179 Canola endoplasmic reticulum 79.09 77.33
AT3G19390.1 Thale cress endoplasmic reticulum 71.82 69.91
CDX99227 Canola endoplasmic reticulum 77.95 67.65
TraesCS2D01G547600.1 Wheat cytosol, mitochondrion, nucleus, plastid 46.14 55.16
CDY17093 Canola endoplasmic reticulum 54.55 52.52
CDY17044 Canola endoplasmic reticulum 54.77 52.51
CDY63586 Canola endoplasmic reticulum 54.55 52.29
CDY06760 Canola endoplasmic reticulum 54.09 52.08
CDX71540 Canola extracellular 54.32 51.96
CDY22370 Canola extracellular 54.32 51.96
CDX75633 Canola vacuole 43.64 51.34
CDX69285 Canola endoplasmic reticulum, vacuole 43.64 51.34
CDY22445 Canola vacuole 43.64 51.34
CDY25228 Canola extracellular 53.64 51.3
Zm00001d001900_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 53.86 50.97
CDY17193 Canola endoplasmic reticulum 36.59 50.63
Zm00001d026577_P001 Maize extracellular, golgi, plasma membrane 53.86 50.43
CDY39574 Canola cytosol, endoplasmic reticulum, nucleus 33.64 50.34
TraesCS7D01G265100.1 Wheat cytosol, nucleus, plastid 29.32 50.0
CDY44047 Canola vacuole 43.64 50.0
TraesCS2A01G545700.1 Wheat unclear 53.41 49.79
TraesCS2D01G546600.1 Wheat plasma membrane, vacuole 53.64 49.68
TraesCS2B01G576300.1 Wheat unclear 52.73 49.47
TraesCS2B01G577500.1 Wheat endoplasmic reticulum 52.5 49.36
TraesCS2B01G577300.1 Wheat extracellular, golgi 52.5 49.25
EES13064 Sorghum extracellular, plasma membrane, vacuole 52.27 49.25
TraesCS2D01G547800.1 Wheat endoplasmic reticulum, extracellular 51.59 48.5
TraesCS7B01G162200.1 Wheat endoplasmic reticulum 50.45 48.16
HORVU7Hr1G055310.1 Barley extracellular 50.91 47.97
CDY31861 Canola endoplasmic reticulum 38.41 47.88
CDY01351 Canola endoplasmic reticulum 38.18 47.86
TraesCS2A01G546700.1 Wheat endoplasmic reticulum 50.68 47.65
TraesCS2A01G546300.1 Wheat endoplasmic reticulum, vacuole 50.68 47.55
TraesCS5D01G149800.1 Wheat endoplasmic reticulum 50.45 47.44
Os04t0670200-02 Rice extracellular 52.95 47.36
EES11628 Sorghum extracellular 50.68 47.35
TraesCS7A01G264200.1 Wheat endoplasmic reticulum 50.68 47.05
CDY58055 Canola golgi, nucleus, plastid 34.09 46.58
CDX96617 Canola endoplasmic reticulum 34.55 46.48
HORVU2Hr1G121150.1 Barley endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 51.14 46.3
CDY33651 Canola endoplasmic reticulum 34.09 46.01
CDX75496 Canola endoplasmic reticulum 37.05 45.79
CDY48168 Canola endoplasmic reticulum 37.27 45.68
HORVU2Hr1G121440.2 Barley endoplasmic reticulum 51.59 45.4
CDY50483 Canola endoplasmic reticulum 35.23 44.8
Os04t0670500-01 Rice extracellular 49.77 44.69
CDX77621 Canola endoplasmic reticulum, extracellular 34.77 44.61
CDX87758 Canola endoplasmic reticulum 35.0 44.51
CDX83168 Canola endoplasmic reticulum 36.36 44.32
CDY37617 Canola endoplasmic reticulum, extracellular 37.05 44.05
CDY34045 Canola endoplasmic reticulum 36.14 44.04
CDY63262 Canola extracellular, plasma membrane, vacuole 24.77 43.95
CDY25281 Canola extracellular 37.05 43.94
CDX93470 Canola plasma membrane 44.09 43.79
CDX94938 Canola extracellular, vacuole 43.86 43.67
CDY27951 Canola endoplasmic reticulum 45.45 43.57
CDY25283 Canola vacuole 36.82 43.43
CDX69132 Canola plastid 36.82 42.63
CDY39575 Canola endoplasmic reticulum 35.23 42.12
CDY16132 Canola endoplasmic reticulum, extracellular, vacuole 35.68 41.42
CDY31498 Canola cytosol 27.95 41.14
CDY02431 Canola nucleus 41.14 40.31
Protein Annotations
Gene3D:3.10.20.500Gene3D:3.90.70.10MapMan:50.3.4GO:A0A078E274EnsemblPlants:CDX95451ProteinID:CDX95451
ProteinID:CDX95451.1GO:GO:0003674GO:GO:0003824GO:GO:0006508GO:GO:0008150GO:GO:0008152
GO:GO:0008234GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00101214001InterPro:GranulinInterPro:Granulin_sf
InterPro:IPR037277PFAM:PF00112PFAM:PF00396PFAM:PF08246PRINTS:PR00705PANTHER:PTHR12411
PANTHER:PTHR12411:SF352InterPro:Papain_like_cys_pep_sfInterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29SMART:SM00277
SMART:SM00645SMART:SM00848SUPFAM:SSF54001SUPFAM:SSF57277SignalP:SignalP-noTMUniParc:UPI0004EED5D1
SEG:seg:::::
Description
BnaC01g33430D
Coordinates
chrLK031889:-:215532..217623
Molecular Weight (calculated)
47842.3 Da
IEP (calculated)
6.352
GRAVY (calculated)
-0.324
Length
440 amino acids
Sequence
(BLAST)
001: MSTRITFTFP SLVILSVLLA SSYSGGVTAK VVDQNLTEQK LFERWLVENH KNYNGLGEKD KRFQIFIDNA RFVQKHNSVP NQSYELGLTR FADLTNEEFR
101: AMYLRKKMER RTSRIPVKAE RYLHKAGDSL PYEVDWRAKG AVAPVRDQGD CGSSWAFSTT GAIEGINKIK TGELITLSVQ ELVDCDRGYN DGCNGGLMDA
201: AFLFIIANGG LDTEADYPYT ATDNNTCNSD KKNTRVVTID GYVAVPGNDE KSLKKAVAHQ PVSVAIEAGG REFQLYKSGV FTGACGTDLD HAALAVGYGT
301: SEGQDYWIIR DSLGSNWGES GYIRLQRNVN DSAGKCGVAM LASYPTQSVV CDKSYTCPDK STCCCVSESK GKCDSWGCCP FESATCCENG SSCCPQLYPV
401: CDLEDGTCRV KANSPLSVKA LTRGPATATT KATNVLVSSA
Best Arabidopsis Sequence Match ( AT1G09850.1 )
(BLAST)
001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
Arabidopsis Description
XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.