Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY50154 | Canola | endoplasmic reticulum | 97.95 | 97.95 |
CDX95457 | Canola | endoplasmic reticulum, extracellular, vacuole | 81.82 | 80.18 |
CDY50157 | Canola | endoplasmic reticulum, extracellular, vacuole | 81.14 | 79.51 |
CDY46179 | Canola | endoplasmic reticulum | 79.09 | 77.33 |
AT3G19390.1 | Thale cress | endoplasmic reticulum | 71.82 | 69.91 |
CDX99227 | Canola | endoplasmic reticulum | 77.95 | 67.65 |
TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 46.14 | 55.16 |
CDY17093 | Canola | endoplasmic reticulum | 54.55 | 52.52 |
CDY17044 | Canola | endoplasmic reticulum | 54.77 | 52.51 |
CDY63586 | Canola | endoplasmic reticulum | 54.55 | 52.29 |
CDY06760 | Canola | endoplasmic reticulum | 54.09 | 52.08 |
CDX71540 | Canola | extracellular | 54.32 | 51.96 |
CDY22370 | Canola | extracellular | 54.32 | 51.96 |
CDX75633 | Canola | vacuole | 43.64 | 51.34 |
CDX69285 | Canola | endoplasmic reticulum, vacuole | 43.64 | 51.34 |
CDY22445 | Canola | vacuole | 43.64 | 51.34 |
CDY25228 | Canola | extracellular | 53.64 | 51.3 |
Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 53.86 | 50.97 |
CDY17193 | Canola | endoplasmic reticulum | 36.59 | 50.63 |
Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 53.86 | 50.43 |
CDY39574 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.64 | 50.34 |
TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 29.32 | 50.0 |
CDY44047 | Canola | vacuole | 43.64 | 50.0 |
TraesCS2A01G545700.1 | Wheat | unclear | 53.41 | 49.79 |
TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 53.64 | 49.68 |
TraesCS2B01G576300.1 | Wheat | unclear | 52.73 | 49.47 |
TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 52.5 | 49.36 |
TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 52.5 | 49.25 |
EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 52.27 | 49.25 |
TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 51.59 | 48.5 |
TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 50.45 | 48.16 |
HORVU7Hr1G055310.1 | Barley | extracellular | 50.91 | 47.97 |
CDY31861 | Canola | endoplasmic reticulum | 38.41 | 47.88 |
CDY01351 | Canola | endoplasmic reticulum | 38.18 | 47.86 |
TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 50.68 | 47.65 |
TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 50.68 | 47.55 |
TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 50.45 | 47.44 |
Os04t0670200-02 | Rice | extracellular | 52.95 | 47.36 |
EES11628 | Sorghum | extracellular | 50.68 | 47.35 |
TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 50.68 | 47.05 |
CDY58055 | Canola | golgi, nucleus, plastid | 34.09 | 46.58 |
CDX96617 | Canola | endoplasmic reticulum | 34.55 | 46.48 |
HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 51.14 | 46.3 |
CDY33651 | Canola | endoplasmic reticulum | 34.09 | 46.01 |
CDX75496 | Canola | endoplasmic reticulum | 37.05 | 45.79 |
CDY48168 | Canola | endoplasmic reticulum | 37.27 | 45.68 |
HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 51.59 | 45.4 |
CDY50483 | Canola | endoplasmic reticulum | 35.23 | 44.8 |
Os04t0670500-01 | Rice | extracellular | 49.77 | 44.69 |
CDX77621 | Canola | endoplasmic reticulum, extracellular | 34.77 | 44.61 |
CDX87758 | Canola | endoplasmic reticulum | 35.0 | 44.51 |
CDX83168 | Canola | endoplasmic reticulum | 36.36 | 44.32 |
CDY37617 | Canola | endoplasmic reticulum, extracellular | 37.05 | 44.05 |
CDY34045 | Canola | endoplasmic reticulum | 36.14 | 44.04 |
CDY63262 | Canola | extracellular, plasma membrane, vacuole | 24.77 | 43.95 |
CDY25281 | Canola | extracellular | 37.05 | 43.94 |
CDX93470 | Canola | plasma membrane | 44.09 | 43.79 |
CDX94938 | Canola | extracellular, vacuole | 43.86 | 43.67 |
CDY27951 | Canola | endoplasmic reticulum | 45.45 | 43.57 |
CDY25283 | Canola | vacuole | 36.82 | 43.43 |
CDX69132 | Canola | plastid | 36.82 | 42.63 |
CDY39575 | Canola | endoplasmic reticulum | 35.23 | 42.12 |
CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.68 | 41.42 |
CDY31498 | Canola | cytosol | 27.95 | 41.14 |
CDY02431 | Canola | nucleus | 41.14 | 40.31 |
Protein Annotations
Gene3D:3.10.20.500 | Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:A0A078E274 | EnsemblPlants:CDX95451 | ProteinID:CDX95451 |
ProteinID:CDX95451.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00101214001 | InterPro:Granulin | InterPro:Granulin_sf |
InterPro:IPR037277 | PFAM:PF00112 | PFAM:PF00396 | PFAM:PF08246 | PRINTS:PR00705 | PANTHER:PTHR12411 |
PANTHER:PTHR12411:SF352 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00277 |
SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SUPFAM:SSF57277 | SignalP:SignalP-noTM | UniParc:UPI0004EED5D1 |
SEG:seg | : | : | : | : | : |
Description
BnaC01g33430D
Coordinates
chrLK031889:-:215532..217623
Molecular Weight (calculated)
47842.3 Da
IEP (calculated)
6.352
GRAVY (calculated)
-0.324
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTRITFTFP SLVILSVLLA SSYSGGVTAK VVDQNLTEQK LFERWLVENH KNYNGLGEKD KRFQIFIDNA RFVQKHNSVP NQSYELGLTR FADLTNEEFR
101: AMYLRKKMER RTSRIPVKAE RYLHKAGDSL PYEVDWRAKG AVAPVRDQGD CGSSWAFSTT GAIEGINKIK TGELITLSVQ ELVDCDRGYN DGCNGGLMDA
201: AFLFIIANGG LDTEADYPYT ATDNNTCNSD KKNTRVVTID GYVAVPGNDE KSLKKAVAHQ PVSVAIEAGG REFQLYKSGV FTGACGTDLD HAALAVGYGT
301: SEGQDYWIIR DSLGSNWGES GYIRLQRNVN DSAGKCGVAM LASYPTQSVV CDKSYTCPDK STCCCVSESK GKCDSWGCCP FESATCCENG SSCCPQLYPV
401: CDLEDGTCRV KANSPLSVKA LTRGPATATT KATNVLVSSA
101: AMYLRKKMER RTSRIPVKAE RYLHKAGDSL PYEVDWRAKG AVAPVRDQGD CGSSWAFSTT GAIEGINKIK TGELITLSVQ ELVDCDRGYN DGCNGGLMDA
201: AFLFIIANGG LDTEADYPYT ATDNNTCNSD KKNTRVVTID GYVAVPGNDE KSLKKAVAHQ PVSVAIEAGG REFQLYKSGV FTGACGTDLD HAALAVGYGT
301: SEGQDYWIIR DSLGSNWGES GYIRLQRNVN DSAGKCGVAM LASYPTQSVV CDKSYTCPDK STCCCVSESK GKCDSWGCCP FESATCCENG SSCCPQLYPV
401: CDLEDGTCRV KANSPLSVKA LTRGPATATT KATNVLVSSA
001: MSMSSSSFIS LTFFFLLLVS SSSSSDDISE LFDDWCQKHG KTYGSEEERQ QRIQIFKDNH DFVTQHNLIT NATYSLSLNA FADLTHHEFK ASRLGLSVSA
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
101: PSVIMASKGQ SLGGSVKVPD SVDWRKKGAV TNVKDQGSCG ACWSFSATGA MEGINQIVTG DLISLSEQEL IDCDKSYNAG CNGGLMDYAF EFVIKNHGID
201: TEKDYPYQER DGTCKKDKLK QKVVTIDSYA GVKSNDEKAL MEAVAAQPVS VGICGSERAF QLYSSGIFSG PCSTSLDHAV LIVGYGSQNG VDYWIVKNSW
301: GKSWGMDGFM HMQRNTENSD GVCGINMLAS YPIKTHPNPP PPSPPGPTKC NLFTYCSSGE TCCCARELFG LCFSWKCCEI ESAVCCKDGR HCCPHDYPVC
401: DTTRSLCLKK TGNFTAIKPF WKKNSSKQLG RFEEWVM
Arabidopsis Description
XBCP3At1g09850 [Source:UniProtKB/TrEMBL;Acc:Q0WVJ5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.