Factsheet for Bra022080.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000393.1-P
Bra004928.1-P
Bra039324.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47590.1	Bra000393.1-P	AT2G45660.1	21798944
AT5G47590.1	Bra004928.1-P	AT2G45660.1	21798944
AT5G47590.1	Bra039324.1-P	AT2G45660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022085.2-P	Field mustard	cytosol	100.0	67.28
CDY43630	Canola	cytosol	71.56	67.24
Bra022083.1-P	Field mustard	cytosol	100.0	58.29
Bra022051.1-P	Field mustard	cytosol	86.24	36.43
Bra034108.1-P	Field mustard	cytosol	72.48	33.62
Bra022079.1-P	Field mustard	cytosol	61.47	33.33
Bra024976.1-P	Field mustard	cytosol	73.39	30.08
Bra024932.1-P	Field mustard	cytosol	58.72	25.4
Bra012704.1-P	Field mustard	cytosol, extracellular, vacuole	27.52	21.13
Bra024930.1-P	Field mustard	cytosol	49.54	20.77
AT5G47590.1	Thale cress	cytosol	49.54	20.45
Bra002567.1-P	Field mustard	cytosol	50.46	14.44
Bra038485.1-P	Field mustard	cytosol	23.85	11.56
Bra012707.1-P	Field mustard	cytosol	24.77	10.98
Bra038484.1-P	Field mustard	cytosol	26.61	10.94
Bra040740.1-P	Field mustard	cytosol	22.94	9.8
Bra008244.1-P	Field mustard	cytosol	22.02	8.48
Bra012708.1-P	Field mustard	cytosol	17.43	7.6
Bra012705.1-P	Field mustard	cytosol	25.69	7.02

Protein Annotations

EnsemblPlants:Bra022080.1

EnsemblPlants:Bra022080.1-P

EnsemblPlantsGene:Bra022080

UniParc:UPI0002546111

UniProt:M4DZY3

MapMan:35.2

Description

AT5G47590 (E=6e-011) | heat shock protein-related

Coordinates

chrA02:+:19103776..19104219

Molecular Weight (calculated)

11938.3 Da

IEP (calculated)

5.141

GRAVY (calculated)

-0.206

Length

109 amino acids

Sequence
(BLAST)

001: MKDGVLRMIV SRVKVKDHDN KCTLFLPPNT GVCGDDMLVL PNENEVKFYG ENKEVCEHDE SCRIFMGAVK GSSFCAPGVP PLSHDIAWDA EFGVLKVRVS
101: PPGSNISSE

Best Arabidopsis Sequence Match ( AT5G47590.1 )
(BLAST)

001: MGETKADFRD MSRIPKVREG FYATNNQFQK AGPKGFVQVK VLENDNLYVR VDLPGVPDDA VRYRVDAVRQ KVVFFSGETL NNGKEGVRQY SGTAGLGCDC
101: CEITGVDAKM KDGVLRMILT RVKVVSKAQD NNNNKCTLTV PPFTGQSGIR LEDHPCLVSG RKGALIGVTK AGGGAHFAVD MPGVSPDDVE VYADEKEIRF
201: KAEIKDVYEH DESGRTYLGS VQSPFPALIS NNTIAWDAEF GVLRIAVIPP DDMTTINNKR NPIE

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family [Source:UniProtKB/TrEMBL;Acc:Q9FGJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.