Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50905 Canola cytosol 97.88 97.88
Bra012704.1-P Field mustard cytosol, extracellular, vacuole 21.55 42.96
Bra038484.1-P Field mustard cytosol 39.58 42.26
Bra038485.1-P Field mustard cytosol 33.22 41.78
Bra040740.1-P Field mustard cytosol 37.46 41.57
Bra012708.1-P Field mustard cytosol 31.45 35.6
Bra012707.1-P Field mustard cytosol 27.21 31.3
Bra012705.1-P Field mustard cytosol 42.76 30.33
Bra024930.1-P Field mustard cytosol 25.09 27.31
Bra024932.1-P Field mustard cytosol 24.03 26.98
Bra022079.1-P Field mustard cytosol 18.37 25.87
Bra024976.1-P Field mustard cytosol 23.67 25.19
Bra022083.1-P Field mustard cytosol 16.25 24.6
Bra034108.1-P Field mustard cytosol 19.79 23.83
Bra022051.1-P Field mustard cytosol 21.2 23.26
Bra022080.1-P Field mustard cytosol 8.48 22.02
Bra022085.2-P Field mustard cytosol 11.66 20.37
Bra002567.1-P Field mustard cytosol 21.91 16.27
Protein Annotations
EnsemblPlants:Bra008244.1EnsemblPlants:Bra008244.1-PEnsemblPlantsGene:Bra008244Gene3D:2.60.40.790InterPro:A-crystallin/Hsp20_domInterPro:HSP20
InterPro:HSP20-like_chaperoneInterPro:IPR002068InterPro:IPR008978PANTHER:PTHR11527PANTHER:PTHR11527:SF95PFscan:PS01031
SUPFAM:SSF49764UniParc:UPI0002545D4DUniProt:M4CVJ7MapMan:35.1::
Description
AT4G16560 (E=1e-047) | heat shock protein-related
Coordinates
chrA02:+:14042100..14044045
Molecular Weight (calculated)
30626.3 Da
IEP (calculated)
6.038
GRAVY (calculated)
-0.195
Length
283 amino acids
Sequence
(BLAST)
001: MEIRFVEPVP QSEGMYYATN NPYQVNGPRG FTEFKVLDGT AKLFVRIDFP GVRNNSVKIL LDPSQKAVFV SGEAPQEMVY DASLREFGTA TGLLCDCCRI
101: TNVESVLGDG VLRLILSKET IDFRVGSSCS ARAYTSVRAS SSLSRLIRGY DPEVAGGHPL AHLRGHGPQG HRGTDPLDPA FTGPDIVPNP LVQTGSTSAY
201: ESKQLSDGGL FLRIDMPGVP NDKFAVTVEN GCVTVTGRAP AAMDDSSGRE YRGNVAVVPR DYDSRRIEAF ANEGVIRLII HSI
Best Arabidopsis Sequence Match ( AT4G16550.1 )
(BLAST)
001: MSIPHIAPVP HPRDGYYATN NPYQVNGPKG FTEFKYLEET HDLFVRLDFP GIQKESVIIL LEPSKKAVIV TGEAPKESKH DSSHRKYGTA TGLICDCCEI
101: SNIQCFVGDG VVRLILSKQK INLRVPIFCS FGGARMPTDA SPNIIRGYNP EVAGGHPLAH LRGLNPEGCR GTDPFDPAFT GPTIRPHPSV LEGSTSAYET
201: KQLSNGGLYL RIDMPGVPSD GFIVAVDGNG VVTIMGRAPA TMHDSSGRSY VCKVAIVPRG YAGVGSR
Arabidopsis Description
HSP20-like chaperone [Source:TAIR;Acc:AT4G16550]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.