Factsheet for Bra038484.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32265	Canola	cytosol	100.0	100.0
AT2G03020.1	Thale cress	cytosol	60.0	62.35
Bra012704.1-P	Field mustard	cytosol, extracellular, vacuole	32.83	61.27
AT4G16540.1	Thale cress	cytosol	53.58	61.21
Bra040740.1-P	Field mustard	cytosol	56.23	58.43
Bra038485.1-P	Field mustard	cytosol	46.42	54.67
Bra008244.1-P	Field mustard	cytosol	42.26	39.58
Bra012708.1-P	Field mustard	cytosol	36.98	39.2
Bra012707.1-P	Field mustard	cytosol	35.85	38.62
Bra012705.1-P	Field mustard	cytosol	58.11	38.6
Bra022079.1-P	Field mustard	cytosol	24.91	32.84
Bra022083.1-P	Field mustard	cytosol	21.89	31.02
Bra024932.1-P	Field mustard	cytosol	29.43	30.95
Bra024930.1-P	Field mustard	cytosol	28.68	29.23
Bra024976.1-P	Field mustard	cytosol	28.3	28.2
Bra034108.1-P	Field mustard	cytosol	24.53	27.66
Bra022051.1-P	Field mustard	cytosol	26.42	27.13
Bra022080.1-P	Field mustard	cytosol	10.94	26.61
Bra022085.2-P	Field mustard	cytosol	15.47	25.31
Bra002567.1-P	Field mustard	cytosol	25.66	17.85

Protein Annotations

EnsemblPlants:Bra038484.1	EnsemblPlants:Bra038484.1-P	EnsemblPlantsGene:Bra038484	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	InterPro:Small_heat_shock_prot_prd_pln	PANTHER:PTHR11527	PANTHER:PTHR11527:SF95
PFscan:PS01031	PIRSF:PIRSF030283	SUPFAM:SSF49764	UniParc:UPI0002544501	UniProt:M4FBL8	MapMan:35.1

Description

AT4G16550 (E=2e-088) | heat shock protein-related

Coordinates

chrA01:+:10934395..10935606

Molecular Weight (calculated)

28901.8 Da

IEP (calculated)

7.620

GRAVY (calculated)

-0.114

Length

265 amino acids

Sequence
(BLAST)

001: MAAVPLPAVP QSPEGFYAIN NEFLMNGPKG FQEFKILEND IMFVRMDFPG VPEDGVSVTL DQSKTLVSVS AKAPRFHTHD LSHRNYFIIT GLGCGCCEIS
101: GFTYHMTDGV LRLHLSKTNI LHPQLPSCTS FLGGIRFKGD GDLSGCPHRL PYNRNPYHPA LTGPVLMRHP NVAEGTAMAY ESKQLENGSL YVRLDMPGVP
201: KDNFNVSVSS GRVKVTGQAP AVSHDSDGRF YSGDVAMLSA PIDVPSRPIK TIIKDGVIRL FIPSV

Best Arabidopsis Sequence Match ( AT4G16545.1 )
(BLAST)

001: MVVPLRAIPS SREGFYAINN QFQANGPKGF MEFKMLENED MYVRIDFPGV PRDGVRVFLD QSKKAVCIFA DAPKEHKYDY SERNYGTSTG LVCKCCEISG
101: FTSFMSDGVL RLLLTKSNIT PQRSSCISFL AGPDFREDLR GNGPHKFPHG TDPNDPKLTG RILMPHPCVN YGSEMAYESK QLQNGGLYVR VDMPGVPKEN
201: FTVAVMNGRV RVTGEAPAIS HDSSGRFYTG DVAMLSTPFD IPIRKIKIIA KNGVIRLIIP PV

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.