Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90512 | Canola | cytosol | 93.09 | 92.34 |
| Bra012708.1-P | Field mustard | cytosol | 39.84 | 39.2 |
| Bra040740.1-P | Field mustard | cytosol | 39.43 | 38.04 |
| Bra038484.1-P | Field mustard | cytosol | 38.62 | 35.85 |
| Bra038485.1-P | Field mustard | cytosol | 32.52 | 35.56 |
| Bra012704.1-P | Field mustard | cytosol, extracellular, vacuole | 20.33 | 35.21 |
| Bra022079.1-P | Field mustard | cytosol | 23.58 | 28.86 |
| Bra024932.1-P | Field mustard | cytosol | 28.86 | 28.17 |
| Bra008244.1-P | Field mustard | cytosol | 31.3 | 27.21 |
| Bra022083.1-P | Field mustard | cytosol | 19.92 | 26.2 |
| Bra024930.1-P | Field mustard | cytosol | 26.83 | 25.38 |
| Bra022080.1-P | Field mustard | cytosol | 10.98 | 24.77 |
| Bra012705.1-P | Field mustard | cytosol | 39.02 | 24.06 |
| Bra022051.1-P | Field mustard | cytosol | 25.2 | 24.03 |
| Bra024976.1-P | Field mustard | cytosol | 25.61 | 23.68 |
| Bra034108.1-P | Field mustard | cytosol | 21.95 | 22.98 |
| Bra022085.2-P | Field mustard | cytosol | 14.63 | 22.22 |
| Bra002567.1-P | Field mustard | cytosol | 22.76 | 14.7 |
Protein Annotations
Description
AT2G03020 (E=2e-035) | heat shock protein-related
Coordinates
chrA03:-:22621084..22622008
Molecular Weight (calculated)
26854.8 Da
IEP (calculated)
4.458
GRAVY (calculated)
-0.179
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMGAEGFYA LNNPFQTNGP KWFCEKKWLG IEVPDMYLRL DLPGVGPDPD DVDVSVVDSK RVLIIKALAP CLNINDSSPR SYETYFRLDC HCCEISSVDN
101: PQVTHGVLRL LVSTTPINIG GSPDDDIHSR LLRLDPDDQE PELSGQIVEP HLGLSEGPAS AYEYKQLLGD SVYVRLDMPG VSDVDINVDT VNKRVDVVGE
201: APTVSHDSGG RSYSVAAHLG LGALITPPRV EHNVENGVVR LFIHPG
101: PQVTHGVLRL LVSTTPINIG GSPDDDIHSR LLRLDPDDQE PELSGQIVEP HLGLSEGPAS AYEYKQLLGD SVYVRLDMPG VSDVDINVDT VNKRVDVVGE
201: APTVSHDSGG RSYSVAAHLG LGALITPPRV EHNVENGVVR LFIHPG
001: MAMAVPVSAR PQSPEGFYAI NNQFQTNGPK GFSEIKILAN EDMFLRMDLP GVPDEGGLSV YHNRSQETVV VFAKAPKVHT HDSTERRYQT MTGIGCSCCA
101: ISSITTHMSD GVFRVILSKT RIDPHRSPCT VLGCSGFRED LRGTDPNDPA LTGPVLQPHP LAFPQPTMAY ESKQLPNGKL FVRADMPGVP KENFTVSVTN
201: GRVKVTGQAP AVSHDSSGRF YSGDVAMLST PVDIPSRRIK TIAKNGVIRL LIPPF
101: ISSITTHMSD GVFRVILSKT RIDPHRSPCT VLGCSGFRED LRGTDPNDPA LTGPVLQPHP LAFPQPTMAY ESKQLPNGKL FVRADMPGVP KENFTVSVTN
201: GRVKVTGQAP AVSHDSSGRF YSGDVAMLST PVDIPSRRIK TIAKNGVIRL LIPPF
Arabidopsis Description
Heat shock protein HSP20/alpha crystallin family [Source:UniProtKB/TrEMBL;Acc:Q84X24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.