CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012707.1-P	Field mustard	cytosol	92.34	93.09
CDY09681	Canola	cytosol	66.53	71.74
CDY09703	Canola	plastid	46.37	45.1
CDX90513	Canola	cytosol	40.32	40.0
CDY09683	Canola	cytosol	22.18	39.86
CDY09677	Canola	extracellular	21.37	38.69
CDX90510	Canola	cytosol	39.92	37.79
CDY50850	Canola	cytosol	40.32	37.74
CDY53640	Canola	cytosol	40.32	37.74
CDX90508	Canola	extracellular	21.37	37.59
CDY09679	Canola	cytosol	37.1	36.95
CDY32265	Canola	cytosol	39.11	36.6
CDY32266	Canola	cytosol	32.66	36.0
CDY40537	Canola	cytosol	32.26	35.56
CDY40538	Canola	cytosol	37.1	34.72
CDY63876	Canola	cytosol	36.29	34.62
CDY09678	Canola	cytosol	35.08	31.87
CDY46005	Canola	mitochondrion	20.56	30.72
CDX90509	Canola	cytosol	31.45	29.43
CDX77779	Canola	cytosol	30.24	29.07
CDY17724	Canola	cytosol	29.44	28.97
CDY50905	Canola	cytosol	32.66	28.62
CDY43629	Canola	cytosol	21.77	28.57
CDX87694	Canola	cytosol	21.37	27.04
CDY37163	Canola	mitochondrion	21.37	27.04
CDY53682	Canola	cytosol	28.23	26.52
CDX77784	Canola	cytosol	27.02	26.07
CDY37166	Canola	cytosol	23.79	25.99
CDX77781	Canola	cytosol	27.02	25.87
CDY17722	Canola	cytosol	27.02	25.77
CDX84467	Canola	cytosol	10.89	25.0
CDX77721	Canola	cytosol	26.61	24.63
CDX77719	Canola	cytosol	22.58	24.45
CDY67243	Canola	cytosol	17.34	24.16
CDY41336	Canola	cytosol	25.81	24.06
CDY56707	Canola	cytosol	25.4	23.86
CDX80270	Canola	cytosol	24.19	22.81
CDY37164	Canola	mitochondrion	14.92	20.33
CDY33502	Canola	cytosol	21.37	20.0
CDY46006	Canola	cytosol	20.16	19.92
CDY43630	Canola	cytosol	8.87	18.97
CDY33037	Canola	cytosol	23.39	17.21

Protein Annotations

EnsemblPlants:CDX90512	EnsemblPlantsGene:GSBRNA2T00151137001	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR008978	PANTHER:PTHR11527
PANTHER:PTHR11527:SF95	ProteinID:CDX90512	ProteinID:CDX90512.1	SEG:seg	SUPFAM:SSF49764	UniParc:UPI0004EE8D6E
MapMan:35.2	:	:	:	:	:

Description

BnaA03g42690D

Coordinates

chrLK031863:+:631483..632909

Molecular Weight (calculated)

26980.9 Da

IEP (calculated)

4.458

GRAVY (calculated)

-0.185

Length

248 amino acids

Sequence
(BLAST)

001: MLMGAEGFYA LNNPFQTNGP KWFCEKKWLG IEVPDMYLRL DLPGVGPDPD DVDVSVVDSK RVLIIKALAP CLNINDSSPR SYETYFRLDC HCCEISSVDN
101: PQVTHGVLRL LVSTTPINIG GSPDDDIHSR LLRLDPDADQ EPELSGQIVE PHPGLSEGPA SAYEYKQLLG DSVYVRLDMP GVSDVDINVD TVNKRVDVVG
201: EAPTVSHDSG GRSYSAVAAH LGLGALITPP RVEHNVENGV VRLFIHPG

Best Arabidopsis Sequence Match ( AT2G03020.1 )
(BLAST)

001: MAMAVPVSAR PQSPEGFYAI NNQFQTNGPK GFSEIKILAN EDMFLRMDLP GVPDEGGLSV YHNRSQETVV VFAKAPKVHT HDSTERRYQT MTGIGCSCCA
101: ISSITTHMSD GVFRVILSKT RIDPHRSPCT VLGCSGFRED LRGTDPNDPA LTGPVLQPHP LAFPQPTMAY ESKQLPNGKL FVRADMPGVP KENFTVSVTN
201: GRVKVTGQAP AVSHDSSGRF YSGDVAMLST PVDIPSRRIK TIAKNGVIRL LIPPF

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family [Source:UniProtKB/TrEMBL;Acc:Q84X24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.