CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040740.1-P	Field mustard	cytosol	94.72	98.43
CDY50850	Canola	cytosol	97.74	97.74
AT4G16545.1	Thale cress	cytosol	65.66	66.41
CDX90510	Canola	cytosol	64.53	65.27
CDY09679	Canola	cytosol	59.25	63.05
CDY32265	Canola	cytosol	58.11	58.11
CDY09677	Canola	extracellular	29.81	57.66
CDY40538	Canola	cytosol	56.98	56.98
CDX90508	Canola	extracellular	29.81	56.03
CDY40537	Canola	cytosol	42.26	49.78
CDY32266	Canola	cytosol	42.26	49.78
CDY63876	Canola	cytosol	47.92	48.85
CDY09681	Canola	cytosol	39.62	45.65
CDY09678	Canola	cytosol	45.66	44.32
CDX90512	Canola	cytosol	37.74	40.32
CDX90513	Canola	cytosol	37.74	40.0
CDY09683	Canola	cytosol	20.38	39.13
CDX90509	Canola	cytosol	38.49	38.49
CDY50905	Canola	cytosol	40.38	37.81
CDY09703	Canola	plastid	35.85	37.25
CDY46005	Canola	mitochondrion	23.02	36.75
CDX77779	Canola	cytosol	30.94	31.78
CDY37163	Canola	mitochondrion	23.4	31.63
CDX77784	Canola	cytosol	30.57	31.52
CDY43629	Canola	cytosol	22.26	31.22
CDY17724	Canola	cytosol	29.43	30.95
CDX77719	Canola	cytosol	26.42	30.57
CDX77781	Canola	cytosol	28.3	28.96
CDY17722	Canola	cytosol	28.3	28.85
CDY41336	Canola	cytosol	28.68	28.57
CDX80270	Canola	cytosol	27.92	28.14
CDY56707	Canola	cytosol	27.92	28.03
CDY37166	Canola	cytosol	23.77	27.75
CDY53682	Canola	cytosol	27.55	27.65
CDX77721	Canola	cytosol	27.92	27.61
CDX87694	Canola	cytosol	20.38	27.55
CDY67243	Canola	cytosol	16.98	25.28
CDY33502	Canola	cytosol	24.53	24.53
CDY37164	Canola	mitochondrion	16.6	24.18
CDY46006	Canola	cytosol	21.51	22.71
CDX84467	Canola	cytosol	9.06	22.22
CDY33037	Canola	cytosol	27.92	21.96
CDY43630	Canola	cytosol	8.3	18.97

Protein Annotations

EnsemblPlants:CDY53640	EnsemblPlantsGene:GSBRNA2T00011117001	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068
InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF95	PFscan:PS01031	ProteinID:CDY53640	ProteinID:CDY53640.1
SEG:seg	SUPFAM:SSF49764	UniParc:UPI0004EE9AFD	UniProt:A0A078IRG1	MapMan:35.1	:

Description

BnaA08g30300DBnaA08g30300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRG1]

Coordinates

chrLK033223:-:1065..2427

Molecular Weight (calculated)

29014.2 Da

IEP (calculated)

7.924

GRAVY (calculated)

-0.106

Length

265 amino acids

Sequence
(BLAST)

001: MVVPLSAIPP SREDGFYAIN NQFLANGPKG FQELKTLENE DMFIRVDFPG VPEDAMKVVV DDTKKAVTVF ALAPKEHKHD SSPRNYIYTT GLVCKCCEIS
101: AVAAHMSDGV LRLLLSKTQI ATQRPPFLGV PDSEQVVVKD HAWTGSHKVT YGTDPHADSV LTGRVLQPHP WVKQGSLMSY ESKQLQNGCL YVRVDMPGVP
201: KERFTVSVKS GMVMVTGDAP AVSHDSGGRF YSGEVAMLSN PIDIPIRQIK IICKNGVIRL IIPPA

Best Arabidopsis Sequence Match ( AT4G16545.1 )
(BLAST)

001: MVVPLRAIPS SREGFYAINN QFQANGPKGF MEFKMLENED MYVRIDFPGV PRDGVRVFLD QSKKAVCIFA DAPKEHKYDY SERNYGTSTG LVCKCCEISG
101: FTSFMSDGVL RLLLTKSNIT PQRSSCISFL AGPDFREDLR GNGPHKFPHG TDPNDPKLTG RILMPHPCVN YGSEMAYESK QLQNGGLYVR VDMPGVPKEN
201: FTVAVMNGRV RVTGEAPAIS HDSSGRFYTG DVAMLSTPFD IPIRKIKIIA KNGVIRLIIP PV

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.