Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY50905 | Canola | cytosol | 51.39 | 45.58 |
AT4G16555.1 | Thale cress | cytosol | 20.72 | 29.89 |
CDX90509 | Canola | cytosol | 30.68 | 29.06 |
CDY09678 | Canola | cytosol | 30.28 | 27.84 |
CDY32266 | Canola | cytosol | 22.71 | 25.33 |
CDY40537 | Canola | cytosol | 22.31 | 24.89 |
CDY40538 | Canola | cytosol | 25.9 | 24.53 |
CDX90510 | Canola | cytosol | 24.7 | 23.66 |
CDY09681 | Canola | cytosol | 21.51 | 23.48 |
CDY37163 | Canola | mitochondrion | 18.33 | 23.47 |
CDY32265 | Canola | cytosol | 24.7 | 23.4 |
CDY09679 | Canola | cytosol | 21.91 | 22.09 |
CDY50850 | Canola | cytosol | 22.71 | 21.51 |
CDY53640 | Canola | cytosol | 22.71 | 21.51 |
CDX90513 | Canola | cytosol | 21.12 | 21.2 |
CDX77719 | Canola | cytosol | 19.12 | 20.96 |
CDY67243 | Canola | cytosol | 14.74 | 20.79 |
CDX77784 | Canola | cytosol | 21.12 | 20.62 |
CDX77781 | Canola | cytosol | 21.12 | 20.46 |
CDY17722 | Canola | cytosol | 21.12 | 20.38 |
CDX90512 | Canola | cytosol | 19.92 | 20.16 |
CDY41336 | Canola | cytosol | 21.12 | 19.92 |
CDX77721 | Canola | cytosol | 21.12 | 19.78 |
CDX77779 | Canola | cytosol | 20.32 | 19.77 |
CDY56707 | Canola | cytosol | 20.72 | 19.7 |
CDY63876 | Canola | cytosol | 20.32 | 19.62 |
CDY09703 | Canola | plastid | 19.92 | 19.61 |
CDX80270 | Canola | cytosol | 20.32 | 19.39 |
CDX87694 | Canola | cytosol | 15.14 | 19.39 |
CDY17724 | Canola | cytosol | 19.12 | 19.05 |
CDY37166 | Canola | cytosol | 17.13 | 18.94 |
CDY53682 | Canola | cytosol | 19.92 | 18.94 |
CDY43629 | Canola | cytosol | 13.55 | 17.99 |
CDY33037 | Canola | cytosol | 20.72 | 15.43 |
CDY09677 | Canola | extracellular | 8.37 | 15.33 |
CDY33502 | Canola | cytosol | 15.94 | 15.09 |
CDX90508 | Canola | extracellular | 7.97 | 14.18 |
CDY37164 | Canola | mitochondrion | 9.56 | 13.19 |
CDX84467 | Canola | cytosol | 5.58 | 12.96 |
CDY43630 | Canola | cytosol | 3.59 | 7.76 |
CDY09683 | Canola | cytosol | 3.19 | 5.8 |
CDY46005 | Canola | mitochondrion | 3.59 | 5.42 |
Protein Annotations
EnsemblPlants:CDY46006 | EnsemblPlantsGene:GSBRNA2T00083119001 | InterPro:HSP20-like_chaperone | InterPro:IPR008978 | ProteinID:CDY46006 | ProteinID:CDY46006.1 |
SUPFAM:SSF49764 | UniParc:UPI0004EECC3A | UniProt:A0A078I808 | MapMan:35.1 | : | : |
Description
BnaA02g17900DBnaA02g17900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I808]
Coordinates
chrLK032645:-:187704..189094
Molecular Weight (calculated)
28867.5 Da
IEP (calculated)
7.692
GRAVY (calculated)
0.058
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIRFVEPVP QSEGMYYATN NPYQVNGPRG FTEFKVLDGT AKLFVRIDFP GVRNNSVKIL LDPSQKAVFV SGEAPQEMVY DASLREFGTA TGLLCDCCRI
101: TNVESVLGDG VLRLILSKET IDFHVGSSCS VWFQTTTHTT ILVWFQTTTH TTILVWFQTT THTTILVWFQ TTTHTTILVW FQTTTHTTIL VWFQTTTHTT
201: ILVWFQTTTH TTILVWFQTT THTTILVWFQ TTTHTTILVW FQTTRKHTRR S
101: TNVESVLGDG VLRLILSKET IDFHVGSSCS VWFQTTTHTT ILVWFQTTTH TTILVWFQTT THTTILVWFQ TTTHTTILVW FQTTTHTTIL VWFQTTTHTT
201: ILVWFQTTTH TTILVWFQTT THTTILVWFQ TTTHTTILVW FQTTRKHTRR S
001: MSIPHIAPVP HPRDGYYATN NPYQVNGPKG FTEFKYLEET HDLFVRLDFP GIQKESVIIL LEPSKKAVIV TGEAPKESKH DSSHRKYGTA TGLICDCCEI
101: SNIQCFVGDG VVRLILSKQK INLRVPIFCS FGGARMPTDA SPNIIRGYNP EVAGGHPLAH LRGLNPEGCR GTDPFDPAFT GPTIRPHPSV LEGSTSAYET
201: KQLSNGGLYL RIDMPGVPSD GFIVAVDGNG VVTIMGRAPA TMHDSSGRSY VCKVAIVPRG YAGVGSR
101: SNIQCFVGDG VVRLILSKQK INLRVPIFCS FGGARMPTDA SPNIIRGYNP EVAGGHPLAH LRGLNPEGCR GTDPFDPAFT GPTIRPHPSV LEGSTSAYET
201: KQLSNGGLYL RIDMPGVPSD GFIVAVDGNG VVTIMGRAPA TMHDSSGRSY VCKVAIVPRG YAGVGSR
Arabidopsis Description
HSP20-like chaperone [Source:TAIR;Acc:AT4G16550]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.