Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84467 | Canola | cytosol | 41.84 | 75.93 |
| CDY37166 | Canola | cytosol | 79.08 | 68.28 |
| CDY43629 | Canola | cytosol | 57.65 | 59.79 |
| Bra022051.1-P | Field mustard | cytosol | 77.55 | 58.91 |
| CDY53682 | Canola | cytosol | 78.57 | 58.33 |
| CDY67243 | Canola | cytosol | 52.55 | 57.87 |
| CDY43630 | Canola | cytosol | 33.67 | 56.9 |
| CDY56707 | Canola | cytosol | 71.43 | 53.03 |
| CDX77721 | Canola | cytosol | 72.45 | 52.99 |
| CDY37163 | Canola | mitochondrion | 51.53 | 51.53 |
| CDY41336 | Canola | cytosol | 69.9 | 51.5 |
| CDX80270 | Canola | cytosol | 68.88 | 51.33 |
| CDY33502 | Canola | cytosol | 67.35 | 49.81 |
| CDX77719 | Canola | cytosol | 56.12 | 48.03 |
| CDY17724 | Canola | cytosol | 56.63 | 44.05 |
| CDY37164 | Canola | mitochondrion | 40.82 | 43.96 |
| CDX77784 | Canola | cytosol | 57.14 | 43.58 |
| CDX77779 | Canola | cytosol | 57.14 | 43.41 |
| CDY17722 | Canola | cytosol | 55.1 | 41.54 |
| CDX77781 | Canola | cytosol | 54.59 | 41.31 |
| AT5G47590.1 | Thale cress | cytosol | 55.61 | 41.29 |
| CDY33037 | Canola | cytosol | 61.22 | 35.61 |
| CDY09681 | Canola | cytosol | 27.55 | 23.48 |
| CDY32265 | Canola | cytosol | 30.1 | 22.26 |
| CDX90512 | Canola | cytosol | 27.04 | 21.37 |
| CDY09677 | Canola | extracellular | 14.8 | 21.17 |
| CDY40538 | Canola | cytosol | 28.06 | 20.75 |
| CDY53640 | Canola | cytosol | 27.55 | 20.38 |
| CDY50850 | Canola | cytosol | 27.55 | 20.38 |
| CDX90510 | Canola | cytosol | 27.04 | 20.23 |
| CDY09703 | Canola | plastid | 26.02 | 20.0 |
| CDY40537 | Canola | cytosol | 22.96 | 20.0 |
| CDY32266 | Canola | cytosol | 22.45 | 19.56 |
| CDX90508 | Canola | extracellular | 13.78 | 19.15 |
| CDX90513 | Canola | cytosol | 23.98 | 18.8 |
| CDY09679 | Canola | cytosol | 23.47 | 18.47 |
| CDY09678 | Canola | cytosol | 25.51 | 18.32 |
| CDX90509 | Canola | cytosol | 23.98 | 17.74 |
| CDY50905 | Canola | cytosol | 25.0 | 17.31 |
| CDY63876 | Canola | cytosol | 21.43 | 16.15 |
| CDY09683 | Canola | cytosol | 11.22 | 15.94 |
| CDY46005 | Canola | mitochondrion | 13.27 | 15.66 |
| CDY46006 | Canola | cytosol | 19.39 | 15.14 |
Protein Annotations
| EnsemblPlants:CDX87694 | EnsemblPlantsGene:GSBRNA2T00146712001 | InterPro:HSP20-like_chaperone | InterPro:IPR008978 | ProteinID:CDX87694 | ProteinID:CDX87694.1 |
| SEG:seg | SUPFAM:SSF49764 | UniParc:UPI0004EDEA7E | MapMan:35.2 | : | : |
Description
BnaC02g32550D
Coordinates
chrLK031851:+:231251..232047
Molecular Weight (calculated)
21602.4 Da
IEP (calculated)
4.742
GRAVY (calculated)
-0.366
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIKILENDN LYVRADLPGV PDDGVRHRVD SVRQKVVFFS GEETLGGDGD KVDDDVREYS GTAGLGCDCC EITGVDAKMK DGVLRMIVSR VKIKDHDNKC
101: THFLPTQHSL FIGKSGSVCS DDILVHPNEN EVKFYGENKE VYEHDDSCRI FMGAITRSSV CAPGVPLLSH DIAWDAEFGV LTVRITPPGS SNTNRE
101: THFLPTQHSL FIGKSGSVCS DDILVHPNEN EVKFYGENKE VYEHDDSCRI FMGAITRSSV CAPGVPLLSH DIAWDAEFGV LTVRITPPGS SNTNRE
001: MGETKADFRD MSRIPKVREG FYATNNQFQK AGPKGFVQVK VLENDNLYVR VDLPGVPDDA VRYRVDAVRQ KVVFFSGETL NNGKEGVRQY SGTAGLGCDC
101: CEITGVDAKM KDGVLRMILT RVKVVSKAQD NNNNKCTLTV PPFTGQSGIR LEDHPCLVSG RKGALIGVTK AGGGAHFAVD MPGVSPDDVE VYADEKEIRF
201: KAEIKDVYEH DESGRTYLGS VQSPFPALIS NNTIAWDAEF GVLRIAVIPP DDMTTINNKR NPIE
101: CEITGVDAKM KDGVLRMILT RVKVVSKAQD NNNNKCTLTV PPFTGQSGIR LEDHPCLVSG RKGALIGVTK AGGGAHFAVD MPGVSPDDVE VYADEKEIRF
201: KAEIKDVYEH DESGRTYLGS VQSPFPALIS NNTIAWDAEF GVLRIAVIPP DDMTTINNKR NPIE
Arabidopsis Description
Heat shock protein HSP20/alpha crystallin family [Source:UniProtKB/TrEMBL;Acc:Q9FGJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.