Factsheet for AT5G47590.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17724	Canola	cytosol	59.09	61.9
Bra024932.1-P	Field mustard	cytosol	58.71	61.51
CDX77784	Canola	cytosol	59.85	61.48
CDY17722	Canola	cytosol	59.85	60.77
CDX77781	Canola	cytosol	59.47	60.62
Bra024930.1-P	Field mustard	cytosol	59.47	60.38
CDX77779	Canola	cytosol	58.71	60.08
CDX77719	Canola	cytosol	50.38	58.08
Bra024976.1-P	Field mustard	cytosol	58.33	57.89
CDX80270	Canola	cytosol	57.58	57.79
Bra022083.1-P	Field mustard	cytosol	40.53	57.22
CDY37163	Canola	mitochondrion	42.05	56.63
Bra034108.1-P	Field mustard	cytosol	50.0	56.17
CDY41336	Canola	cytosol	56.06	55.64
CDX87694	Canola	cytosol	41.29	55.61
CDY67243	Canola	cytosol	37.12	55.06
CDY56707	Canola	cytosol	54.92	54.92
CDX77721	Canola	cytosol	55.3	54.48
Bra022079.1-P	Field mustard	cytosol	41.29	54.23
CDY37166	Canola	cytosol	46.59	54.19
CDY53682	Canola	cytosol	52.65	52.65
CDY33502	Canola	cytosol	51.89	51.7
CDY43629	Canola	cytosol	36.74	51.32
Bra022085.2-P	Field mustard	cytosol	31.06	50.62
Bra022080.1-P	Field mustard	cytosol	20.45	49.54
CDX84467	Canola	cytosol	20.08	49.07
Bra022051.1-P	Field mustard	cytosol	47.73	48.84
CDY37164	Canola	mitochondrion	32.2	46.7
CDY33037	Canola	cytosol	53.79	42.14
CDY43630	Canola	cytosol	17.05	38.79
Bra002567.1-P	Field mustard	cytosol	50.38	34.91
AT4G16545.1	Thale cress	cytosol	32.2	32.44
AT4G16555.1	Thale cress	cytosol	20.08	30.46
AT4G16540.1	Thale cress	cytosol	26.52	30.17
AT2G03020.1	Thale cress	cytosol	28.41	29.41
AT4G16550.1	Thale cress	cytosol	24.24	23.97
AT4G16560.1	Thale cress	cytosol	26.52	13.16

Protein Annotations

Gene3D:2.60.40.790	MapMan:35.1	EntrezGene:834809	ProteinID:AED95535.1	ArrayExpress:AT5G47590	EnsemblPlantsGene:AT5G47590
RefSeq:AT5G47590	TAIR:AT5G47590	RefSeq:AT5G47590-TAIR-G	EnsemblPlants:AT5G47590.1	TAIR:AT5G47590.1	EMBL:AY054549
ProteinID:BAB09085.1	EMBL:BT003423	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR008978	RefSeq:NP_199570.1
PIRSF:PIRSF030283	PO:PO:0000293	PANTHER:PTHR11527	PANTHER:PTHR11527:SF95	UniProt:Q9FGJ8	SUPFAM:SSF49764
InterPro:Small_heat_shock_prot_prd_pln	UniParc:UPI000000C00C	:	:	:	:

Description

Heat shock protein HSP20/alpha crystallin family [Source:UniProtKB/TrEMBL;Acc:Q9FGJ8]

Coordinates

chr5:-:19297614..19299174

Molecular Weight (calculated)

28946.5 Da

IEP (calculated)

6.291

GRAVY (calculated)

-0.374

Length

264 amino acids

Sequence
(BLAST)

001: MGETKADFRD MSRIPKVREG FYATNNQFQK AGPKGFVQVK VLENDNLYVR VDLPGVPDDA VRYRVDAVRQ KVVFFSGETL NNGKEGVRQY SGTAGLGCDC
101: CEITGVDAKM KDGVLRMILT RVKVVSKAQD NNNNKCTLTV PPFTGQSGIR LEDHPCLVSG RKGALIGVTK AGGGAHFAVD MPGVSPDDVE VYADEKEIRF
201: KAEIKDVYEH DESGRTYLGS VQSPFPALIS NNTIAWDAEF GVLRIAVIPP DDMTTINNKR NPIE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.