CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90510	Canola	cytosol	97.59	92.75
AT4G16545.1	Thale cress	cytosol	66.27	62.98
CDY53640	Canola	cytosol	63.05	59.25
CDY50850	Canola	cytosol	62.25	58.49
Bra012705.1-P	Field mustard	cytosol	93.57	58.4
CDY09677	Canola	extracellular	30.92	56.2
CDY32265	Canola	cytosol	57.83	54.34
CDY40538	Canola	cytosol	56.63	53.21
CDX90508	Canola	extracellular	30.12	53.19
CDY63876	Canola	cytosol	50.6	48.46
CDY40537	Canola	cytosol	42.57	47.11
CDY32266	Canola	cytosol	42.17	46.67
CDY09678	Canola	cytosol	49.0	44.69
CDY46005	Canola	mitochondrion	27.71	41.57
CDY09681	Canola	cytosol	37.75	40.87
CDY50905	Canola	cytosol	44.18	38.87
CDX90509	Canola	cytosol	40.96	38.49
CDY09703	Canola	plastid	38.55	37.65
CDX90513	Canola	cytosol	37.75	37.6
CDX90512	Canola	cytosol	36.95	37.1
CDY09683	Canola	cytosol	20.48	36.96
CDX77779	Canola	cytosol	30.92	29.84
CDY17724	Canola	cytosol	28.92	28.57
CDX77784	Canola	cytosol	28.92	28.02
CDY41336	Canola	cytosol	27.71	25.94
CDX84467	Canola	cytosol	11.24	25.93
CDX77781	Canola	cytosol	26.91	25.87
CDY37163	Canola	mitochondrion	20.08	25.51
CDX80270	Canola	cytosol	26.91	25.48
CDY56707	Canola	cytosol	26.91	25.38
CDX77719	Canola	cytosol	23.29	25.33
CDY17722	Canola	cytosol	26.1	25.0
CDY53682	Canola	cytosol	26.51	25.0
CDX77721	Canola	cytosol	26.91	25.0
CDY43629	Canola	cytosol	18.88	24.87
CDY37164	Canola	mitochondrion	17.27	23.63
CDX87694	Canola	cytosol	18.47	23.47
CDY37166	Canola	cytosol	21.29	23.35
CDY33502	Canola	cytosol	24.1	22.64
CDY46006	Canola	cytosol	22.09	21.91
CDY67243	Canola	cytosol	14.86	20.79
CDY33037	Canola	cytosol	25.7	18.99
CDY43630	Canola	cytosol	7.23	15.52

Protein Annotations

EnsemblPlants:CDY09679	EnsemblPlantsGene:GSBRNA2T00031347001	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR008978	PANTHER:PTHR11527
PANTHER:PTHR11527:SF95	ProteinID:CDY09679	ProteinID:CDY09679.1	SUPFAM:SSF49764	UniParc:UPI0004EE9B51	UniProt:A0A078F9J5
MapMan:35.1	:	:	:	:	:

Description

BnaC07g33820DBnaC07g33820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9J5]

Coordinates

chrLK031998:+:420543..421840

Molecular Weight (calculated)

26689.1 Da

IEP (calculated)

7.866

GRAVY (calculated)

-0.187

Length

249 amino acids

Sequence
(BLAST)

001: MVVPLTVAPP SRAEGFYAVN NPFLVSGPKG FTEFKMLENE DIIKVRIDPT KKAVSITADA PKEHKHDSSP RNYGSATGLV CKCCEISGLV SHMSDGVLRL
101: HLSKTRASSQ SPSCISFLGG PDREDRCSTG PHTFPHGTDP HDPELTGPLL EPHPCVNIGS DMAYEWKILS NGGLYVRVDM PGVPKDRFTV SVVNGRVSVT
201: GDAPAVGLDS GGRFYSGEVA MLESQVSIPG RKIKTIAKNG VIRLIIPPL

Best Arabidopsis Sequence Match ( AT4G16545.1 )
(BLAST)

001: MVVPLRAIPS SREGFYAINN QFQANGPKGF MEFKMLENED MYVRIDFPGV PRDGVRVFLD QSKKAVCIFA DAPKEHKYDY SERNYGTSTG LVCKCCEISG
101: FTSFMSDGVL RLLLTKSNIT PQRSSCISFL AGPDFREDLR GNGPHKFPHG TDPNDPKLTG RILMPHPCVN YGSEMAYESK QLQNGGLYVR VDMPGVPKEN
201: FTVAVMNGRV RVTGEAPAIS HDSSGRFYTG DVAMLSTPFD IPIRKIKIIA KNGVIRLIIP PV

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.