CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09677	Canola	extracellular	91.49	94.16
Bra012704.1-P	Field mustard	cytosol, extracellular, vacuole	82.98	82.39
CDY32266	Canola	cytosol	57.45	36.0
CDY40537	Canola	cytosol	57.45	36.0
AT2G03020.1	Thale cress	cytosol	62.41	34.51
AT4G16540.1	Thale cress	cytosol	56.74	34.48
CDY09683	Canola	cytosol	31.91	32.61
CDY32265	Canola	cytosol	60.28	32.08
CDY46005	Canola	mitochondrion	36.88	31.33
CDY40538	Canola	cytosol	58.16	30.94
CDY09679	Canola	cytosol	53.19	30.12
CDY53640	Canola	cytosol	56.03	29.81
CDY50850	Canola	cytosol	55.32	29.43
CDX90510	Canola	cytosol	53.9	29.01
CDY63876	Canola	cytosol	48.23	26.15
CDX84467	Canola	cytosol	19.86	25.93
CDY09678	Canola	cytosol	42.55	21.98
CDX90512	Canola	cytosol	37.59	21.37
CDY50905	Canola	cytosol	42.55	21.2
CDY09703	Canola	plastid	38.3	21.18
CDX90513	Canola	cytosol	36.88	20.8
CDY09681	Canola	cytosol	31.91	19.57
CDX90509	Canola	cytosol	29.08	15.47
CDY37164	Canola	mitochondrion	19.86	15.38
CDX77784	Canola	cytosol	26.95	14.79
CDY17724	Canola	cytosol	26.24	14.68
CDY43630	Canola	cytosol	12.06	14.66
CDX77779	Canola	cytosol	26.24	14.34
CDX87694	Canola	cytosol	19.15	13.78
CDY43629	Canola	cytosol	18.44	13.76
CDX77781	Canola	cytosol	24.82	13.51
CDY53682	Canola	cytosol	24.82	13.26
CDX77721	Canola	cytosol	24.82	13.06
CDY33502	Canola	cytosol	23.4	12.45
CDY17722	Canola	cytosol	22.7	12.31
CDY37166	Canola	cytosol	19.15	11.89
CDX80270	Canola	cytosol	21.99	11.79
CDY41336	Canola	cytosol	21.99	11.65
CDY56707	Canola	cytosol	21.28	11.36
CDX77719	Canola	cytosol	18.44	11.35
CDY67243	Canola	cytosol	12.77	10.11
CDY33037	Canola	cytosol	22.7	9.5
CDY37163	Canola	mitochondrion	12.77	9.18
CDY46006	Canola	cytosol	14.18	7.97

Protein Annotations

EnsemblPlants:CDX90508	EnsemblPlantsGene:GSBRNA2T00151133001	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068
InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF95	PFscan:PS01031	ProteinID:CDX90508	ProteinID:CDX90508.1
SUPFAM:SSF49764	UniParc:UPI0004EE6AFC	MapMan:35.2	:	:	:

Description

BnaA03g42730D

Coordinates

chrLK031863:+:609494..615183

Molecular Weight (calculated)

15114.5 Da

IEP (calculated)

8.321

GRAVY (calculated)

0.237

Length

141 amino acids

Sequence
(BLAST)

001: MSDGVLRLVL SKTCTDPSSC ICTLLKMYLL FSLSDLVGLS GDNTDDHGKF TSLITCVYES KQLENGSLYV RLDMPGVPKE NFAVTVANGI VKVTAPSVSH
101: DSAGRLYSGD VAMLSAPVNI PSRRIKTIAK NGVIRLLIPP L

Best Arabidopsis Sequence Match ( AT2G03020.1 )
(BLAST)

001: MAMAVPVSAR PQSPEGFYAI NNQFQTNGPK GFSEIKILAN EDMFLRMDLP GVPDEGGLSV YHNRSQETVV VFAKAPKVHT HDSTERRYQT MTGIGCSCCA
101: ISSITTHMSD GVFRVILSKT RIDPHRSPCT VLGCSGFRED LRGTDPNDPA LTGPVLQPHP LAFPQPTMAY ESKQLPNGKL FVRADMPGVP KENFTVSVTN
201: GRVKVTGQAP AVSHDSSGRF YSGDVAMLST PVDIPSRRIK TIAKNGVIRL LIPPF

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family [Source:UniProtKB/TrEMBL;Acc:Q84X24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.