Factsheet for Bra038485.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32266	Canola	cytosol	97.33	97.33
Bra012704.1-P	Field mustard	cytosol, extracellular, vacuole	34.22	54.23
AT4G16540.1	Thale cress	cytosol	49.33	47.84
Bra038484.1-P	Field mustard	cytosol	54.67	46.42
AT2G03020.1	Thale cress	cytosol	50.67	44.71
Bra040740.1-P	Field mustard	cytosol	48.0	42.35
Bra012708.1-P	Field mustard	cytosol	37.78	34.0
Bra008244.1-P	Field mustard	cytosol	41.78	33.22
Bra012707.1-P	Field mustard	cytosol	35.56	32.52
Bra012705.1-P	Field mustard	cytosol	50.22	28.32
Bra024932.1-P	Field mustard	cytosol	27.11	24.21
Bra022083.1-P	Field mustard	cytosol	20.0	24.06
Bra022080.1-P	Field mustard	cytosol	11.56	23.85
Bra022079.1-P	Field mustard	cytosol	20.0	22.39
Bra024976.1-P	Field mustard	cytosol	25.78	21.8
Bra034108.1-P	Field mustard	cytosol	22.22	21.28
Bra022051.1-P	Field mustard	cytosol	23.56	20.54
Bra024930.1-P	Field mustard	cytosol	23.56	20.38
Bra022085.2-P	Field mustard	cytosol	13.78	19.14
Bra002567.1-P	Field mustard	cytosol	23.56	13.91

Protein Annotations

EnsemblPlants:Bra038485.1	EnsemblPlants:Bra038485.1-P	EnsemblPlantsGene:Bra038485	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF95	PFscan:PS01031	SUPFAM:SSF49764
UniParc:UPI0002544500	UniProt:M4FBL9	MapMan:35.1	:	:	:

Description

AT4G16540 (E=4e-059) | heat shock protein-related

Coordinates

chrA01:+:10932460..10933332

Molecular Weight (calculated)

25198.2 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.244

Length

225 amino acids

Sequence
(BLAST)

001: MAAVPEGYYE STNPFLVHGP RGFEEFKLLE GFGMYVRMDF PGVPEECVRI SLDPAKKSLA VYADAPKVHR YDLAQRKYLS VIETVCRCCV FDRFTYQMSD
101: GVLRLHLSKS NIDPRRSSCI EFKYSAFGED ISGNDMDESY ESKQLEDGNL YVRLDMPGVP KDNFTVSVAN GKVNLTGQAP ALRHDSGSRL YSADVVMLSG
201: PVDFPSHRVK TIIKNGVIRL LVPPV

Best Arabidopsis Sequence Match ( AT4G16545.1 )
(BLAST)

001: MVVPLRAIPS SREGFYAINN QFQANGPKGF MEFKMLENED MYVRIDFPGV PRDGVRVFLD QSKKAVCIFA DAPKEHKYDY SERNYGTSTG LVCKCCEISG
101: FTSFMSDGVL RLLLTKSNIT PQRSSCISFL AGPDFREDLR GNGPHKFPHG TDPNDPKLTG RILMPHPCVN YGSEMAYESK QLQNGGLYVR VDMPGVPKEN
201: FTVAVMNGRV RVTGEAPAIS HDSSGRFYTG DVAMLSTPFD IPIRKIKIIA KNGVIRLIIP PV

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7R1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.