Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400053921 | Potato | extracellular | 85.75 | 89.29 |
| Solyc02g093040.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 66.23 | 69.15 |
| VIT_07s0031g00050.t01 | Wine grape | nucleus | 58.31 | 66.97 |
| KRH57968 | Soybean | endoplasmic reticulum | 61.48 | 63.66 |
| KRH04538 | Soybean | extracellular | 61.21 | 63.39 |
| KRH07581 | Soybean | endoplasmic reticulum | 60.69 | 62.84 |
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 58.05 | 58.82 |
| CDY22445 | Canola | vacuole | 57.78 | 58.56 |
| Bra011746.1-P | Field mustard | vacuole | 56.99 | 57.75 |
| CDX75633 | Canola | vacuole | 56.99 | 57.75 |
| AT4G36880.1 | Thale cress | vacuole | 57.26 | 57.71 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 56.46 | 57.22 |
| CDY44047 | Canola | vacuole | 57.78 | 57.03 |
| Solyc04g082710.2.1 | Tomato | cytosol | 45.38 | 56.39 |
| Solyc12g094700.1.1 | Tomato | extracellular | 46.7 | 53.47 |
| Solyc02g076970.1.1 | Tomato | extracellular | 37.73 | 50.89 |
| Solyc12g056000.1.1 | Tomato | endoplasmic reticulum | 45.12 | 50.29 |
| Solyc12g056010.1.1 | Tomato | endoplasmic reticulum | 44.33 | 49.41 |
| Solyc12g056020.1.1 | Tomato | extracellular | 44.33 | 49.27 |
| Solyc03g111730.2.1 | Tomato | endoplasmic reticulum | 46.44 | 48.89 |
| Solyc01g107760.2.1 | Tomato | extracellular | 59.1 | 47.66 |
| Solyc03g006200.1.1 | Tomato | endoplasmic reticulum, extracellular | 37.99 | 47.37 |
| Solyc05g013920.2.1 | Tomato | endoplasmic reticulum | 44.33 | 46.93 |
| Solyc02g076910.2.1 | Tomato | extracellular, golgi | 42.74 | 46.15 |
| Solyc12g088670.1.1 | Tomato | endoplasmic reticulum | 55.94 | 45.49 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 43.54 | 44.84 |
| Solyc04g078540.2.1 | Tomato | endoplasmic reticulum | 54.62 | 43.86 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 53.03 | 43.23 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 53.83 | 42.95 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 52.77 | 42.83 |
| TraesCS2B01G576300.1 | Wheat | unclear | 52.77 | 42.64 |
| TraesCS2A01G545700.1 | Wheat | unclear | 53.03 | 42.58 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 52.51 | 42.34 |
| Solyc03g006210.1.1 | Tomato | extracellular | 37.99 | 41.62 |
| Solyc02g077040.2.1 | Tomato | extracellular | 37.73 | 41.45 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 49.87 | 41.0 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 50.66 | 40.94 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 50.4 | 40.9 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 50.13 | 40.6 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 50.13 | 40.6 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 50.13 | 40.6 |
| Os04t0670200-02 | Rice | extracellular | 52.51 | 40.45 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 50.13 | 40.08 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 49.34 | 39.96 |
| EES11628 | Sorghum | extracellular | 49.6 | 39.92 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 49.34 | 39.87 |
| Solyc02g076980.2.1 | Tomato | endoplasmic reticulum, golgi | 36.15 | 39.71 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 50.13 | 39.09 |
| Os04t0670500-01 | Rice | extracellular | 50.13 | 38.78 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 50.92 | 38.6 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 26.12 | 38.37 |
| Solyc04g080880.2.1 | Tomato | extracellular | 41.69 | 18.7 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | MEROPS:C01.029 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 |
| UniProt:K4BG42 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF526 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc03g044230.1 | EnsemblPlants:Solyc03g044230.1.1 | TMHMM:TMhelix | UniParc:UPI0002768332 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:8496538..8499973
Molecular Weight (calculated)
42542.9 Da
IEP (calculated)
4.811
GRAVY (calculated)
-0.363
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIVVITTFL LIFFVYLINA NDMFYNNNNN NNDTDEEVKR IYEIWLAEHG KIYNGLGEQG KRFEIFKDNL RFIEEHNNSK NQTYVLGLNR FADLTNEEYR
101: TIFLGTKSDA RRRLVESKNA SHHYDFRASD SVPKSVDWRK KGAVAPIKDQ GTCGSCWAFS TVAAVEGINQ IATGEMITLS EQELIDCDRM YNDGCNGGLM
201: DYAFQFIISN GGINTESHYP YNGIDHICDL VQKNAKVVSI DDYEVVAANE KALKKAVAHQ PISVAIEASG RAFQLYSSGI FTGNCGTQLD HGVVVVGYGT
301: ENGVDYWIVR NSWGTNWGED GYIKMERNIE DTNSGKCGIA MEGSYPIKNA INKITMGEEG LQEVSKEITW HGSCLFSEF
101: TIFLGTKSDA RRRLVESKNA SHHYDFRASD SVPKSVDWRK KGAVAPIKDQ GTCGSCWAFS TVAAVEGINQ IATGEMITLS EQELIDCDRM YNDGCNGGLM
201: DYAFQFIISN GGINTESHYP YNGIDHICDL VQKNAKVVSI DDYEVVAANE KALKKAVAHQ PISVAIEASG RAFQLYSSGI FTGNCGTQLD HGVVVVGYGT
301: ENGVDYWIVR NSWGTNWGED GYIKMERNIE DTNSGKCGIA MEGSYPIKNA INKITMGEEG LQEVSKEITW HGSCLFSEF
001: MGFLKLSPMI LLLAMIGVSY AMDMSIISYD ENHHITTETS RSDSEVERIY EAWMVEHGKK KMNQNGLGAE KDQRFEIFKD NLRFIDEHNT KNLSYKLGLT
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
101: RFADLTNEEY RSMYLGAKPT KRVLKTSDRY QARVGDALPD SVDWRKEGAV ADVKDQGSCG SCWAFSTIGA VEGINKIVTG DLISLSEQEL VDCDTSYNQG
201: CNGGLMDYAF EFIIKNGGID TEADYPYKAA DGRCDQNRKN AKVVTIDSYE DVPENSEASL KKALAHQPIS VAIEAGGRAF QLYSSGVFDG LCGTELDHGV
301: VAVGYGTENG KDYWIVRNSW GNRWGESGYI KMARNIEAPT GKCGIAMEAS YPIKKGQNPP NPGPSPPSPI KPPTTCDKYF SCPESNTCCC LYKYGKYCFG
401: WGCCPLEAAT CCDDNSSCCP HEYPVCDVNR GTCLMSKNSP FSVKALKRTP AIPFWAKSRK HIA
Arabidopsis Description
RD21BProbable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.