Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010592.1-P | Field mustard | extracellular, golgi, vacuole | 88.03 | 88.5 |
| CDY22445 | Canola | vacuole | 87.5 | 87.97 |
| CDX69285 | Canola | endoplasmic reticulum, vacuole | 86.44 | 86.9 |
| Bra011746.1-P | Field mustard | vacuole | 85.9 | 86.36 |
| CDX75633 | Canola | vacuole | 85.64 | 86.1 |
| CDY44047 | Canola | vacuole | 87.77 | 85.94 |
| VIT_07s0031g00050.t01 | Wine grape | nucleus | 58.24 | 66.36 |
| PGSC0003DMT400053921 | Potato | extracellular | 57.98 | 59.89 |
| KRH57968 | Soybean | endoplasmic reticulum | 57.18 | 58.74 |
| KRH04538 | Soybean | extracellular | 57.18 | 58.74 |
| PGSC0003DMT400064314 | Potato | endoplasmic reticulum, extracellular, vacuole | 56.12 | 58.45 |
| Solyc02g093040.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 56.38 | 58.4 |
| KRH07581 | Soybean | endoplasmic reticulum | 56.38 | 57.92 |
| Solyc03g044230.1.1 | Tomato | extracellular | 57.71 | 57.26 |
| AT4G23520.1 | Thale cress | endoplasmic reticulum | 50.8 | 53.65 |
| AT3G19400.1 | Thale cress | endoplasmic reticulum, vacuole | 49.2 | 51.1 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 46.28 | 49.01 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 46.54 | 48.48 |
| AT5G43060.1 | Thale cress | endoplasmic reticulum | 59.57 | 48.38 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 45.74 | 48.31 |
| AT1G47128.1 | Thale cress | endoplasmic reticulum | 59.31 | 48.27 |
| AT4G11310.1 | Thale cress | endoplasmic reticulum | 45.48 | 46.98 |
| AT3G19390.1 | Thale cress | endoplasmic reticulum | 55.85 | 46.46 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 44.41 | 46.26 |
| TraesCS2D01G547600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 45.21 | 46.2 |
| Zm00001d026577_P001 | Maize | extracellular, golgi, plasma membrane | 56.38 | 45.11 |
| AT5G45890.1 | Thale cress | endoplasmic reticulum, golgi | 41.49 | 45.09 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 43.35 | 44.78 |
| EES13064 | Sorghum | extracellular, plasma membrane, vacuole | 55.32 | 44.54 |
| AT4G11320.1 | Thale cress | endoplasmic reticulum | 43.88 | 44.47 |
| Zm00001d001900_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 54.79 | 44.3 |
| TraesCS2B01G576300.1 | Wheat | unclear | 53.99 | 43.28 |
| TraesCS2D01G546600.1 | Wheat | plasma membrane, vacuole | 54.26 | 42.95 |
| TraesCS2A01G545700.1 | Wheat | unclear | 53.46 | 42.58 |
| TraesCS2B01G577300.1 | Wheat | extracellular, golgi | 52.66 | 42.22 |
| TraesCS2B01G577500.1 | Wheat | endoplasmic reticulum | 52.39 | 42.09 |
| EES11628 | Sorghum | extracellular | 52.66 | 42.04 |
| TraesCS2A01G546700.1 | Wheat | endoplasmic reticulum | 51.86 | 41.67 |
| TraesCS2D01G547800.1 | Wheat | endoplasmic reticulum, extracellular | 51.86 | 41.67 |
| TraesCS5D01G149800.1 | Wheat | endoplasmic reticulum | 51.86 | 41.67 |
| TraesCS2A01G546300.1 | Wheat | endoplasmic reticulum, vacuole | 51.86 | 41.58 |
| HORVU7Hr1G055310.1 | Barley | extracellular | 51.6 | 41.54 |
| TraesCS7B01G162200.1 | Wheat | endoplasmic reticulum | 50.8 | 41.43 |
| Os04t0670500-01 | Rice | extracellular | 53.19 | 40.82 |
| TraesCS7A01G264200.1 | Wheat | endoplasmic reticulum | 51.33 | 40.72 |
| HORVU2Hr1G121150.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 52.39 | 40.53 |
| Os04t0670200-02 | Rice | extracellular | 51.86 | 39.63 |
| AT1G09850.1 | Thale cress | endoplasmic reticulum | 45.74 | 39.36 |
| TraesCS7D01G265100.1 | Wheat | cytosol, nucleus, plastid | 26.6 | 38.76 |
| HORVU2Hr1G121440.2 | Barley | endoplasmic reticulum | 51.06 | 38.4 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | EntrezGene:829841 | UniProt:A0A178UST0 | ArrayExpress:AT4G36880 | EnsemblPlantsGene:AT4G36880 |
| RefSeq:AT4G36880 | TAIR:AT4G36880 | RefSeq:AT4G36880-TAIR-G | EnsemblPlants:AT4G36880.1 | TAIR:AT4G36880.1 | Unigene:At.26570 |
| Symbol:CP1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | RefSeq:NP_195406.2 | ProteinID:OAO96540.1 |
| PFAM:PF00112 | PFAM:PF08246 | PO:PO:0000037 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00705 | ScanProsite:PS00139 | ScanProsite:PS00639 |
| ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF526 | InterPro:Papain_like_cys_pep_sf | InterPro:Pept_asp_AS | InterPro:Pept_cys_AS |
| InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | SMART:SM00645 | SMART:SM00848 |
| SUPFAM:SSF54001 | SignalP:SignalP-noTM | UniParc:UPI00000A49A2 | SEG:seg | : | : |
Description
CP1CP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UST0]
Coordinates
chr4:-:17374454..17376279
Molecular Weight (calculated)
41640.9 Da
IEP (calculated)
7.747
GRAVY (calculated)
-0.505
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSTKVLSL LLLYVVVSLA SGDESIINDH LQLPSDGKWR TDEEVRSIYL QWSAEHGKTN NNNNGIINDQ DKRFNIFKDN LRFIDLHNEN NKNATYKLGL
101: TKFTDLTNDE YRKLYLGART EPARRIAKAK NVNQKYSAAV NGKEVPETVD WRQKGAVNPI KDQGTCGSCW AFSTTAAVEG INKIVTGELI SLSEQELVDC
201: DKSYNQGCNG GLMDYAFQFI MKNGGLNTEK DYPYRGFGGK CNSFLKNSRV VSIDGYEDVP TKDETALKKA ISYQPVSVAI EAGGRIFQHY QSGIFTGSCG
301: TNLDHAVVAV GYGSENGVDY WIVRNSWGPR WGEEGYIRME RNLAASKSGK CGIAVEASYP VKYSPNPVRG NTISSV
101: TKFTDLTNDE YRKLYLGART EPARRIAKAK NVNQKYSAAV NGKEVPETVD WRQKGAVNPI KDQGTCGSCW AFSTTAAVEG INKIVTGELI SLSEQELVDC
201: DKSYNQGCNG GLMDYAFQFI MKNGGLNTEK DYPYRGFGGK CNSFLKNSRV VSIDGYEDVP TKDETALKKA ISYQPVSVAI EAGGRIFQHY QSGIFTGSCG
301: TNLDHAVVAV GYGSENGVDY WIVRNSWGPR WGEEGYIRME RNLAASKSGK CGIAVEASYP VKYSPNPVRG NTISSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.