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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • golgi 5
  • endoplasmic reticulum 6
  • plasma membrane 4
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G19390.1 Thale cress endoplasmic reticulum 72.65 58.19
AT4G36880.1 Thale cress vacuole 51.1 49.2
AT4G23520.1 Thale cress endoplasmic reticulum 48.34 49.16
AT4G35350.1 Thale cress endoplasmic reticulum 46.13 47.04
AT1G20850.1 Thale cress endoplasmic reticulum 45.86 46.63
AT4G11310.1 Thale cress endoplasmic reticulum 46.13 45.88
AT3G48340.1 Thale cress endoplasmic reticulum, extracellular 45.58 45.71
AT4G11320.1 Thale cress endoplasmic reticulum 46.69 45.55
AT5G45890.1 Thale cress endoplasmic reticulum, golgi 43.37 45.38
AT5G50260.1 Thale cress endoplasmic reticulum 44.2 44.32
AT1G47128.1 Thale cress endoplasmic reticulum 55.8 43.72
AT3G48350.1 Thale cress endoplasmic reticulum 43.92 43.68
AT5G43060.1 Thale cress endoplasmic reticulum 55.8 43.63
TraesCS2D01G547600.1 Wheat cytosol, mitochondrion, nucleus, plastid 44.2 43.48
Zm00001d026577_P001 Maize extracellular, golgi, plasma membrane 54.14 41.7
TraesCS2A01G545700.1 Wheat unclear 54.14 41.53
Zm00001d001900_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 53.31 41.51
TraesCS2D01G546600.1 Wheat plasma membrane, vacuole 54.14 41.26
TraesCS2B01G576300.1 Wheat unclear 53.31 41.15
EES13064 Sorghum extracellular, plasma membrane, vacuole 53.04 41.11
HORVU7Hr1G055310.1 Barley extracellular 53.04 41.11
TraesCS7B01G162200.1 Wheat endoplasmic reticulum 52.21 41.0
EES11628 Sorghum extracellular 53.31 40.98
TraesCS2B01G577500.1 Wheat endoplasmic reticulum 52.76 40.81
TraesCS5D01G149800.1 Wheat endoplasmic reticulum 52.49 40.6
TraesCS2B01G577300.1 Wheat extracellular, golgi 52.49 40.51
Os04t0670200-02 Rice extracellular 54.97 40.45
TraesCS2D01G547800.1 Wheat endoplasmic reticulum, extracellular 51.66 39.96
TraesCS7A01G264200.1 Wheat endoplasmic reticulum 52.21 39.87
TraesCS2A01G546700.1 Wheat endoplasmic reticulum 50.83 39.32
TraesCS2A01G546300.1 Wheat endoplasmic reticulum, vacuole 50.83 39.23
Os04t0670500-01 Rice extracellular 52.76 38.98
HORVU2Hr1G121150.1 Barley endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 51.38 38.27
AT1G09850.1 Thale cress endoplasmic reticulum 45.3 37.53
HORVU2Hr1G121440.2 Barley endoplasmic reticulum 51.38 37.2
TraesCS7D01G265100.1 Wheat cytosol, nucleus, plastid 26.24 36.82
Protein Annotations
Gene3D:3.90.70.10MapMan:50.3.4EntrezGene:821474ProteinID:AEE76236.1EMBL:AK118509ArrayExpress:AT3G19400
EnsemblPlantsGene:AT3G19400RefSeq:AT3G19400TAIR:AT3G19400RefSeq:AT3G19400-TAIR-GEnsemblPlants:AT3G19400.1TAIR:AT3G19400.1
ProteinID:BAB02464.1GO:GO:0003674GO:GO:0003824GO:GO:0004197GO:GO:0005575GO:GO:0005576
GO:GO:0005615GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005764GO:GO:0005773
GO:GO:0005829GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008234
GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0051603MEROPS:I29.003
RefSeq:NP_566634.2PFAM:PF00112PFAM:PF08246PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PRINTS:PR00705ScanProsite:PS00139ScanProsite:PS00639ScanProsite:PS00640
PANTHER:PTHR12411PANTHER:PTHR12411:SF526InterPro:Papain_like_cys_pep_sfInterPro:Pept_asp_ASInterPro:Pept_cys_ASInterPro:Pept_his_AS
InterPro:Peptidase_C1AInterPro:Peptidase_C1A_CInterPro:Prot_inhib_I29UniProt:Q9LT77SMART:SM00645SMART:SM00848
SUPFAM:SSF54001SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000009DCDFSEG:seg:
Description
RDL2Probable cysteine protease RDL2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT77]
Coordinates
chr3:+:6725383..6727105
Molecular Weight (calculated)
40292.4 Da
IEP (calculated)
4.512
GRAVY (calculated)
-0.322
Length
362 amino acids
Sequence
(BLAST)
001: MAATPIRVIV SALVILSVLL LSSSLGVATE TEIERNETEV RLMYEQWLVE NRKNYNGLGE KERRFKIFKD NLKFVDEHNS VPDRTFEVGL TRFADLTNEE
101: FRAIYLRKKM ERTKDSVKTE RYLYKEGDVL PDEVDWRANG AVVSVKDQGN CGSCWAFSAV GAVEGINQIT TGELISLSEQ ELVDCDRGFV NAGCDGGIMN
201: YAFEFIMKNG GIETDQDYPY NANDLGLCNA DKNNNTRVVT IDGYEDVPRD DEKSLKKAVA HQPVSVAIEA SSQAFQLYKS GVMTGTCGIS LDHGVVVVGY
301: GSTSGEDYWI IRNSWGLNWG DSGYVKLQRN IDDPFGKCGI AMMPSYPTKS SFPSSFDLLS EI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.