Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 6
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G11310.1 | Thale cress | endoplasmic reticulum | 88.41 | 90.11 |
| Bra033148.1-P | Field mustard | extracellular | 84.91 | 84.91 |
| CDY25281 | Canola | extracellular | 84.91 | 84.91 |
| CDY37617 | Canola | endoplasmic reticulum, extracellular | 84.37 | 84.59 |
| Bra033146.1-P | Field mustard | vacuole | 83.29 | 82.84 |
| CDY25283 | Canola | vacuole | 83.29 | 82.84 |
| CDY16132 | Canola | endoplasmic reticulum, extracellular, vacuole | 82.48 | 80.74 |
| Bra024736.1-P | Field mustard | endoplasmic reticulum, extracellular | 80.86 | 80.65 |
| AT4G23520.1 | Thale cress | endoplasmic reticulum | 53.1 | 55.34 |
| AT3G19400.1 | Thale cress | endoplasmic reticulum, vacuole | 45.55 | 46.69 |
| AT1G20850.1 | Thale cress | endoplasmic reticulum | 44.74 | 46.63 |
| AT4G35350.1 | Thale cress | endoplasmic reticulum | 44.2 | 46.2 |
| KXG20680 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 43.67 | 45.25 |
| AT4G36880.1 | Thale cress | vacuole | 44.47 | 43.88 |
| AT3G48340.1 | Thale cress | endoplasmic reticulum, extracellular | 42.32 | 43.49 |
| EER88857 | Sorghum | endoplasmic reticulum | 43.13 | 43.01 |
| AT5G43060.1 | Thale cress | endoplasmic reticulum | 52.29 | 41.9 |
| AT5G50260.1 | Thale cress | endoplasmic reticulum | 40.7 | 41.83 |
| AT3G48350.1 | Thale cress | endoplasmic reticulum | 40.7 | 41.48 |
| EER88858 | Sorghum | golgi, vacuole | 43.94 | 41.06 |
| AT5G45890.1 | Thale cress | endoplasmic reticulum, golgi | 38.27 | 41.04 |
| AT1G47128.1 | Thale cress | endoplasmic reticulum | 50.94 | 40.91 |
| Zm00001d036542_P001 | Maize | endoplasmic reticulum, golgi | 43.13 | 39.41 |
| AT3G19390.1 | Thale cress | endoplasmic reticulum | 45.82 | 37.61 |
| AT1G09850.1 | Thale cress | endoplasmic reticulum | 42.32 | 35.93 |
| Zm00001d036541_P002 | Maize | extracellular, plasma membrane | 45.55 | 35.06 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | EntrezGene:826734 | ProteinID:AEE82996.1 | ProteinID:ANM66783.1 | ArrayExpress:AT4G11320 |
| EnsemblPlantsGene:AT4G11320 | RefSeq:AT4G11320 | TAIR:AT4G11320 | RefSeq:AT4G11320-TAIR-G | EnsemblPlants:AT4G11320.1 | TAIR:AT4G11320.1 |
| EMBL:AY035055 | EMBL:AY051062 | ProteinID:CAB51416.1 | ProteinID:CAB81233.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004197 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005773 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0008234 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0051603 | MEROPS:I29.003 | RefSeq:NP_001328659.1 | RefSeq:NP_567377.1 | PFAM:PF00112 | PFAM:PF08246 |
| PO:PO:0000293 | PRINTS:PR00705 | ScanProsite:PS00639 | PFscan:PS51257 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF526 |
| InterPro:Papain_like_cys_pep_sf | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 | UniProt:Q9SUS9 |
| SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000052A21 |
| SEG:seg | : | : | : | : | : |
Description
RDL5Probable cysteine protease RDL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUS9]
Coordinates
chr4:+:6887166..6889879
Molecular Weight (calculated)
40713.0 Da
IEP (calculated)
5.661
GRAVY (calculated)
-0.349
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYAKSAMLI FLLALVIASC ATAMDMSVVS SNDNHHVTAG PGRRQGIFDA EATLMFESWM VKHGKVYDSV AEKERRLTIF EDNLRFITNR NAENLSYRLG
101: LNRFADLSLH EYGEICHGAD PRPPRNHVFM TSSNRYKTSD GDVLPKSVDW RNEGAVTEVK DQGLCRSCWA FSTVGAVEGL NKIVTGELVT LSEQDLINCN
201: KENNGCGGGK VETAYEFIMN NGGLGTDNDY PYKALNGVCE GRLKEDNKNV MIDGYENLPA NDEAALMKAV AHQPVTAVVD SSSREFQLYE SGVFDGTCGT
301: NLNHGVVVVG YGTENGRDYW IVKNSRGDTW GEAGYMKMAR NIANPRGLCG IAMRASYPLK NSFSTDKVSV A
101: LNRFADLSLH EYGEICHGAD PRPPRNHVFM TSSNRYKTSD GDVLPKSVDW RNEGAVTEVK DQGLCRSCWA FSTVGAVEGL NKIVTGELVT LSEQDLINCN
201: KENNGCGGGK VETAYEFIMN NGGLGTDNDY PYKALNGVCE GRLKEDNKNV MIDGYENLPA NDEAALMKAV AHQPVTAVVD SSSREFQLYE SGVFDGTCGT
301: NLNHGVVVVG YGTENGRDYW IVKNSRGDTW GEAGYMKMAR NIANPRGLCG IAMRASYPLK NSFSTDKVSV A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.