Factsheet for TraesCS6B01G379900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G378700.1	Wheat	cytosol, mitochondrion, nucleus	96.62	96.62
Zm00001d037301_P001	Maize	mitochondrion	89.86	62.74
HORVU6Hr1G084520.5	Barley	extracellular	100.0	43.66
TraesCS6B01G380200.1	Wheat	extracellular	100.0	43.66
TraesCS7B01G292000.1	Wheat	cytosol, extracellular, nucleus	89.86	43.32
TraesCS6B01G379200.1	Wheat	extracellular	98.65	43.07
TraesCS6B01G380000.1	Wheat	extracellular	97.97	42.77
TraesCS6B01G378400.1	Wheat	extracellular	97.3	42.48
TraesCS2B01G068000.1	Wheat	extracellular, golgi, plastid	83.11	42.41
TraesCS6B01G378900.1	Wheat	extracellular	96.62	42.18
TraesCS6B01G379300.1	Wheat	extracellular	95.95	41.89
TraesCS6B01G379000.1	Wheat	extracellular	95.95	41.89
KXG19778	Sorghum	cytosol, nucleus, plastid	87.16	41.88
Zm00001d045709_P001	Maize	extracellular	88.51	41.72
Zm00001d045708_P001	Maize	extracellular	90.54	40.73
Zm00001d037303_P001	Maize	extracellular	90.54	39.41
Zm00001d045713_P001	Maize	extracellular	90.54	39.41
Os04t0206300-00	Rice	extracellular	89.86	39.23
TraesCS1B01G236800.1	Wheat	extracellular	89.19	38.94
TraesCS5B01G523100.1	Wheat	extracellular	89.19	38.82
TraesCS2B01G067800.1	Wheat	extracellular	89.19	38.82
Zm00001d045711_P001	Maize	extracellular	89.19	38.82
EER89590	Sorghum	extracellular	89.19	38.82
TraesCS2B01G067700.1	Wheat	extracellular	89.19	38.82
TraesCS7B01G387600.1	Wheat	extracellular	88.51	38.53
TraesCS2B01G067900.1	Wheat	extracellular	88.51	38.53
EES10550	Sorghum	extracellular	88.51	38.53
KXG19775	Sorghum	extracellular	88.51	38.53
KXG19777	Sorghum	extracellular	87.84	38.24
PGSC0003DMT400086163	Potato	cytosol	58.78	37.34
TraesCS4B01G040000.1	Wheat	endoplasmic reticulum, extracellular	83.78	36.36
Solyc02g076970.1.1	Tomato	extracellular	68.92	36.3
TraesCS4B01G039500.1	Wheat	extracellular	82.43	35.78
TraesCS4B01G039900.1	Wheat	endoplasmic reticulum, extracellular	81.76	35.48
TraesCS4B01G039800.1	Wheat	extracellular	81.76	35.48
TraesCS4B01G039600.1	Wheat	extracellular	81.76	35.48
TraesCS4B01G039700.1	Wheat	extracellular	81.08	35.19
PGSC0003DMT400026457	Potato	extracellular	68.92	32.48
KRH55771	Soybean	cytosol, nucleus	60.14	31.79
TraesCS6B01G182200.1	Wheat	extracellular	71.62	30.99
VIT_12s0028g02250.t01	Wine grape	cytosol	62.16	30.98
TraesCS6B01G182100.1	Wheat	endoplasmic reticulum, extracellular	69.59	30.12
PGSC0003DMT400012881	Potato	endoplasmic reticulum	68.24	29.71
Solyc12g056000.1.1	Tomato	endoplasmic reticulum	68.24	29.71
Solyc12g056010.1.1	Tomato	endoplasmic reticulum	68.24	29.71
PGSC0003DMT400026461	Potato	extracellular	67.57	29.41
PGSC0003DMT400012877	Potato	endoplasmic reticulum, extracellular, vacuole	67.57	29.41
Solyc12g056020.1.1	Tomato	extracellular	67.57	29.33
KRH25039	Soybean	extracellular, golgi, vacuole	61.49	29.07
VIT_10s0003g01100.t01	Wine grape	extracellular	66.22	28.82
KRH13244	Soybean	extracellular	64.19	28.61
KRH55801	Soybean	golgi, vacuole	65.54	28.28
TraesCS5B01G072400.1	Wheat	extracellular	64.19	28.19
KRH25765	Soybean	endoplasmic reticulum, golgi	64.86	27.99
KRH55800	Soybean	endoplasmic reticulum, golgi	64.86	27.99
KRG88601	Soybean	endoplasmic reticulum, golgi	64.86	27.99
KRH25728	Soybean	extracellular	64.19	27.7
KRH25766	Soybean	extracellular	64.19	27.7
KRG88605	Soybean	endoplasmic reticulum, golgi	63.51	27.41
KRH25729	Soybean	endoplasmic reticulum, golgi	63.51	27.41
VIT_12s0028g02290.t01	Wine grape	endoplasmic reticulum, extracellular	62.84	27.27
VIT_12s0028g02270.t01	Wine grape	endoplasmic reticulum, extracellular	62.84	27.27
KRH55750	Soybean	extracellular	62.84	27.11
KRH55761	Soybean	extracellular	62.84	27.11
VIT_12s0028g02300.t01	Wine grape	endoplasmic reticulum, extracellular	62.16	26.98
KRH29892	Soybean	extracellular, golgi, vacuole	60.81	26.24
KRH55752	Soybean	endoplasmic reticulum	60.81	26.24
PGSC0003DMT400012885	Potato	extracellular	54.73	26.21
KRH55762	Soybean	endoplasmic reticulum	60.14	25.95
KRH25038	Soybean	extracellular	58.11	25.07
VIT_12s0028g02260.t01	Wine grape	endoplasmic reticulum, extracellular	53.38	24.53
KRH55769	Soybean	extracellular, vacuole	57.43	24.15
TraesCS3B01G380400.1	Wheat	golgi	56.08	22.8
TraesCS3B01G378600.1	Wheat	endoplasmic reticulum	56.08	22.49
TraesCS3B01G447400.1	Wheat	endoplasmic reticulum	56.76	22.46
TraesCS3B01G447500.1	Wheat	extracellular, vacuole	56.08	22.37
TraesCS4B01G076200.1	Wheat	endoplasmic reticulum	60.14	22.25
Solyc03g006200.1.1	Tomato	endoplasmic reticulum, extracellular	44.59	21.71
TraesCS1B01G033200.1	Wheat	endoplasmic reticulum, extracellular, golgi	48.65	20.45
TraesCS5B01G138300.1	Wheat	endoplasmic reticulum, golgi, vacuole	47.97	19.94
TraesCS6B01G308300.1	Wheat	extracellular, vacuole	45.27	18.66
TraesCS2B01G540100.2	Wheat	golgi	56.08	17.93
TraesCS2B01G576300.1	Wheat	unclear	55.41	17.48
TraesCS2B01G577500.1	Wheat	endoplasmic reticulum	53.38	16.88
TraesCS2B01G577300.1	Wheat	extracellular, golgi	53.38	16.84
TraesCS7B01G162200.1	Wheat	endoplasmic reticulum	50.68	16.27
TraesCS1B01G338500.1	Wheat	endoplasmic reticulum, unclear	43.92	14.07

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	PFAM:PF00112	ScanProsite:PS00639
ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF424	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_his_AS
InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	SMART:SM00645	SUPFAM:SSF54001	EnsemblPlantsGene:TraesCS6B01G379900	EnsemblPlants:TraesCS6B01G379900.1
TIGR:cd02248	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:654878858..654879304

Molecular Weight (calculated)

15752.4 Da

IEP (calculated)

4.530

GRAVY (calculated)

-0.429

Length

148 amino acids

Sequence
(BLAST)

001: MDDAFKFIIK NGGLTTESNY PYTAADDKCK SGTNGAATIK SYEDVPANNE GALMQAVASQ PVSVAVDGGD MTFQFYKGGV MTGSCGTDLD HGIAAIGYGK
101: TSDGTKYWLL KNSWGTTWGE NGYLRMEKDI PDKKGMCGLA MEPSYPTA

Best Arabidopsis Sequence Match ( AT2G27420.1 )
(BLAST)

001: MASTIIFILT IFLSYRTSLA TSRGSLFEAS AIEKHEQWMA RFNRVYSDET EKRNRFNIFK KNLEFVQNFN MNNKITYKVD INEFSDLTDE EFRATHTGLV
101: VPEAITRIST LSSGKNTVPF RYGNVSDNGE SMDWRQEGAV TPVKYQGRCG GCWAFSAVAA VEGITKITKG ELVSLSEQQL LDCDRDYNQG CRGGIMSKAF
201: EYIIKNQGIT TEDNYPYQES QQTCSSSTTL SSSFRAATIS GYETVPMNNE EALLQAVSQQ PVSVGIEGTG AAFRHYSGGV FNGECGTDLH HAVTIVGYGM
301: SEEGTKYWVV KNSWGETWGE NGYMRIKRDV DAPQGMCGLA ILAFYPLA

Arabidopsis Description

Cysteine proteinase [Source:UniProtKB/TrEMBL;Acc:Q9ZQH7]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.