Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG88936 | |
| KRG89491 | |
| KRG90996 | nucleus |
| KRG91493 | |
| KRG92238 | nucleus, nucleus |
| KRG92697 | |
| KRG93030 | |
| KRG93247 | |
| KRG93627 | |
| KRG95055 | cytosol, cytosol |
| KRG95056 | cytosol, cytosol |
| KRG96999 | |
| KRG98107 | |
| KRG98129 | |
| KRG99255 | nucleus |
| KRG99448 | cytosol, nucleus |
| KRG99786 | nucleus |
| KRH01000 | |
| KRH01262 | |
| KRH03906 | |
| KRH04529 | nucleus |
| KRH04631 | nucleus |
| KRH05060 | nucleus, nucleus |
| KRH05614 | nucleus, nucleus |
| KRH05705 | |
| KRH06014 | cytosol, nucleus |
| KRH07327 | |
| KRH11080 | |
| KRH11500 | |
| KRH11866 | cytosol, nucleus |
| KRH11952 | |
| KRH13310 | nucleus |
| KRH15339 | |
| KRH15427 | nucleus, nucleus |
| KRH16044 | nucleus, nucleus |
| KRH16410 | nucleus |
| KRH17186 | |
| KRH17547 | cytosol, nucleus |
| KRH17892 | nucleus |
| KRH17986 | nucleus |
| KRH18404 | |
| KRH20664 | nucleus |
| KRH21194 | |
| KRH22479 | nucleus |
| KRH22528 | |
| KRH25068 | |
| KRH25124 | cytosol, cytosol, cytosol, cytosol, nucleus, nucleus, nucleus, nucleus |
| KRH25470 | nucleus |
| KRH26828 | |
| KRH26876 | nucleus |
| KRH27723 | cytosol, nucleus |
| KRH28363 | nucleus |
| KRH28424 | nucleus |
| KRH28480 | nucleus |
| KRH30550 | cytosol, cytosol, cytosol, cytosol, nucleus, nucleus, nucleus, nucleus |
| KRH30612 | |
| KRH30646 | |
| KRH30673 | |
| KRH30674 | |
| KRH34103 | |
| KRH35335 | |
| KRH35760 | nucleus |
| KRH36276 | |
| KRH36517 | |
| KRH36887 | cytosol, nucleus |
| KRH36979 | |
| KRH37522 | cytosol, nucleus |
| KRH39114 | nucleus, nucleus, nucleus |
| KRH40216 | |
| KRH40974 | nucleus |
| KRH41685 | |
| KRH41742 | |
| KRH41754 | |
| KRH41782 | nucleus, nucleus, nucleus |
| KRH42252 | cytosol, nucleus |
| KRH42301 | |
| KRH44391 | nucleus, nucleus, nucleus, nucleus |
| KRH44609 | |
| KRH44667 | |
| KRH44849 | nucleus |
| KRH44990 | |
| KRH45568 | cytosol, nucleus |
| KRH45743 | nucleus |
| KRH46746 | nucleus |
| KRH46991 | |
| KRH47306 | cytosol, nucleus |
| KRH47513 | nucleus, nucleus, nucleus, nucleus |
| KRH48128 | cytosol, nucleus |
| KRH48600 | nucleus, nucleus, nucleus |
| KRH48888 | |
| KRH50258 | nucleus |
| KRH51329 | endoplasmic reticulum, nucleus |
| KRH52055 | nucleus, nucleus |
| KRH52056 | nucleus, nucleus |
| KRH52524 | nucleus, nucleus |
| KRH53279 | nucleus |
| KRH53501 | |
| KRH56054 | nucleus |
| KRH56563 | |
| KRH57185 | |
| KRH57190 | |
| KRH57774 | |
| KRH57804 | nucleus |
| KRH57887 | nucleus |
| KRH57973 | nucleus |
| KRH58370 | cytosol, nucleus |
| KRH58430 | |
| KRH59626 | nucleus |
| KRH60387 | |
| KRH60442 | |
| KRH60454 | |
| KRH60482 | nucleus, nucleus, nucleus |
| KRH60628 | endoplasmic reticulum, nucleus |
| KRH61369 | nucleus, nucleus |
| KRH61371 | nucleus, nucleus |
| KRH61373 | nucleus, nucleus |
| KRH61375 | nucleus, nucleus |
| KRH61850 | nucleus, nucleus |
| KRH63701 | nucleus |
| KRH63972 | nucleus |
| KRH64444 | |
| KRH64625 | nucleus |
| KRH65411 | |
| KRH65519 | |
| KRH65565 | |
| KRH66451 | |
| KRH66713 | cytosol, cytosol |
| KRH66715 | cytosol, cytosol |
| KRH66718 | cytosol, cytosol |
| KRH66720 | cytosol, cytosol |
| KRH68152 | nucleus |
| KRH68751 | |
| KRH69476 | nucleus |
| KRH69654 | cytosol, nucleus |
| KRH70872 | |
| KRH71159 | nucleus |
| KRH71916 | |
| KRH72829 | |
| KRH74510 | cytosol, nucleus |
| KRH74675 | nucleus |
| KRH75016 | |
| KRH76137 | |
| KRH76992 | nucleus |
| KRH77050 | nucleus |
| KRH77118 | nucleus |
| KRH77687 | cytosol, nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11866 | Soybean | cytosol, nucleus | 99.32 | 99.32 |
| PGSC0003DMT400075349 | Potato | cytosol | 93.2 | 93.2 |
| Solyc12g095860.1.1 | Tomato | cytosol, nucleus | 92.86 | 92.86 |
| VIT_15s0045g00310.t01 | Wine grape | cytosol | 92.18 | 92.18 |
| KRH42252 | Soybean | cytosol | 91.5 | 91.5 |
| KRH58370 | Soybean | cytosol | 92.52 | 90.67 |
| TraesCS6B01G105100.1 | Wheat | cytosol | 86.05 | 86.35 |
| TraesCS6A01G078200.1 | Wheat | cytosol | 86.05 | 86.35 |
| GSMUA_Achr11P... | Banana | cytosol | 81.97 | 85.77 |
| Zm00001d053930_P001 | Maize | cytosol | 84.35 | 84.93 |
| Bra018036.1-P | Field mustard | cytosol | 84.35 | 84.35 |
| AT3G48750.1 | Thale cress | cytosol | 84.01 | 84.01 |
| TraesCS4B01G353600.1 | Wheat | cytosol | 84.01 | 84.01 |
| EES04403 | Sorghum | cytosol | 83.67 | 83.96 |
| CDX68497 | Canola | cytosol | 83.67 | 83.67 |
| TraesCS5A01G521700.1 | Wheat | cytosol | 83.67 | 83.67 |
| Zm00001d048497_P002 | Maize | cytosol | 82.99 | 80.53 |
| KXG40336 | Sorghum | cytosol | 80.27 | 80.27 |
| Bra029917.1-P | Field mustard | cytosol | 84.01 | 79.17 |
| CDX83047 | Canola | cytosol | 84.01 | 79.17 |
| CDX87018 | Canola | cytosol | 62.93 | 78.06 |
| TraesCS4D01G347600.1 | Wheat | cytosol | 84.01 | 75.54 |
| CDY66197 | Canola | cytosol | 84.35 | 73.37 |
| HORVU4Hr1G085830.4 | Barley | cytosol | 83.67 | 72.14 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 86.05 | 68.38 |
| Zm00001d027373_P003 | Maize | cytosol | 84.35 | 67.57 |
| Os02t0123100-01 | Rice | mitochondrion | 85.71 | 67.02 |
| CDY05870 | Canola | cytosol, plastid | 83.67 | 64.91 |
| KRH47306 | Soybean | cytosol, nucleus, plasma membrane | 57.82 | 54.14 |
| KRH48128 | Soybean | cytosol | 54.42 | 50.79 |
| KRH37522 | Soybean | cytosol | 54.42 | 50.47 |
| KRH06014 | Soybean | cytosol | 53.74 | 50.32 |
| CDY67496 | Canola | cytosol | 52.38 | 48.73 |
| KRH17547 | Soybean | cytosol | 54.08 | 47.18 |
| KRH26046 | Soybean | cytosol | 44.56 | 44.41 |
| KRH13011 | Soybean | cytosol | 47.28 | 42.25 |
| KRH44859 | Soybean | cytosol | 47.96 | 42.22 |
| KRH41782 | Soybean | cytosol, nucleus | 47.96 | 38.84 |
| KRH59626 | Soybean | cytosol | 40.48 | 38.39 |
| KRH57208 | Soybean | cytosol | 24.83 | 34.43 |
| KRH60482 | Soybean | cytosol | 47.62 | 34.23 |
| KRH57887 | Soybean | cytosol | 27.21 | 33.9 |
| KRH39114 | Soybean | nucleus | 47.28 | 33.82 |
| KRH48600 | Soybean | cytosol | 45.58 | 33.42 |
| KRH40974 | Soybean | cytosol, nucleus | 45.58 | 29.07 |
| KRH63972 | Soybean | cytosol | 45.24 | 28.79 |
| KRH66138 | Soybean | cytosol | 36.39 | 24.6 |
| KRH07433 | Soybean | cytosol | 36.05 | 24.37 |
| KRH76377 | Soybean | cytosol | 36.73 | 24.0 |
| KRH39665 | Soybean | cytosol | 37.07 | 23.96 |
| KRH07697 | Soybean | nucleus | 36.05 | 23.5 |
| KRH07201 | Soybean | cytosol | 32.31 | 22.84 |
| KRH03917 | Soybean | nucleus | 44.22 | 22.73 |
| KRH57202 | Soybean | nucleus | 43.88 | 22.4 |
| KRH42643 | Soybean | nucleus | 47.96 | 18.93 |
| KRH58745 | Soybean | nucleus | 47.96 | 18.9 |
| KRG97452 | Soybean | nucleus | 39.8 | 18.69 |
| KRH31446 | Soybean | nucleus | 46.94 | 18.6 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr9:-:2479420..2485043
Molecular Weight (calculated)
33922.0 Da
IEP (calculated)
8.002
GRAVY (calculated)
-0.287
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQYEKVEKI GEGTYGVVYK ARDRATNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH RNIVRLQDVV HSEKRLYLVF EYLDLDLKKH MDSSPEFVKD
101: PRQVKMFLYQ ILCGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSRH YSTPVDVWSV GCIFAEMVNR
201: RPLFPGDSEI DELFKIFRIL GTPNEDTWPG VTSLPDFKST FPKWPSKDLA NVVPNLDAAG LNLLSSMLCL DPSKRITARS AVEHEYFKDI KFVP
101: PRQVKMFLYQ ILCGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSRH YSTPVDVWSV GCIFAEMVNR
201: RPLFPGDSEI DELFKIFRIL GTPNEDTWPG VTSLPDFKST FPKWPSKDLA NVVPNLDAAG LNLLSSMLCL DPSKRITARS AVEHEYFKDI KFVP
001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
Arabidopsis Description
CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.