CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90206
KRG90340
KRG91493
KRG92238	nucleus
KRG92316
KRG92697
KRG92800
KRG96999
KRG99320
KRG99448	nucleus
KRH02922
KRH06424
KRH11411
KRH18975
KRH20872
KRH20873
KRH26192
KRH33434
KRH33584
KRH33999
KRH34103
KRH34474
KRH35335
KRH45568	nucleus
KRH45698
KRH47859
KRH53956
KRH60444
KRH63981
KRH68751
KRH69654	nucleus
KRH74510	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67580.1	KRG90206	AT1G09760.1	20706207
AT1G67580.1	KRH33434	AT1G09760.1	20706207
AT1G67580.1	KRG99320	AT1G23860.1	20706207
AT1G67580.1	KRH45698	AT1G23860.1	20706207
AT1G67580.1	KRH11411	AT1G61870.1	20706207
AT1G67580.1	KRH20872	AT1G61870.1	20706207
AT1G67580.1	KRH20873	AT1G61870.1	20706207
AT1G67580.1	KRH02922	AT2G18740.1	20706207
AT1G67580.1	KRH18975	AT2G18740.1	20706207
AT1G67580.1	KRH53956	AT2G18740.1	20706207
AT1G67580.1	KRH63981	AT2G18740.1	20706207
AT1G67580.1	KRG92800	AT2G26430.1	20706207
AT1G67580.1	KRH33999	AT2G26430.1	20706207
AT1G67580.1	KRG92238	AT2G32710.1	20407024
AT1G67580.1	KRG90340	AT2G33340.1	20706207
AT1G67580.1	KRH33584	AT2G33340.1	20706207
AT1G67580.1	KRH06424	AT2G46610.1	20706207
AT1G67580.1	KRH47859	AT2G46610.1	20706207
AT1G67580.1	KRG92316	AT2G47640.1	20706207
AT1G67580.1	KRH26192	AT2G47640.1	20706207
AT1G67580.1	KRH34474	AT2G47640.1	20706207
AT1G67580.1	KRH60444	AT2G47640.1	20706207
AT1G67580.1	KRG92697	AT3G04620.1	20706207
AT1G67580.1	KRG96999	AT3G04620.1	20706207
AT1G67580.1	KRH34103	AT3G04620.1	20706207
AT1G67580.1	KRH68751	AT3G04620.1	20706207
AT1G67580.1	KRG92316	AT3G62840.1	20706207
AT1G67580.1	KRH26192	AT3G62840.1	20706207
AT1G67580.1	KRH34474	AT3G62840.1	20706207
AT1G67580.1	KRH60444	AT3G62840.1	20706207
AT1G67580.1	KRG91493	AT4G25550.1	20706207
AT1G67580.1	KRH35335	AT4G25550.1	20706207
AT1G67580.1	KRG99448	AT5G10440.1	20407024
AT1G67580.1	KRH45568	AT5G10440.1	20407024
AT1G67580.1	KRH69654	AT5G10440.1	20407024
AT1G67580.1	KRH74510	AT5G10440.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31446	Soybean	nucleus	92.17	77.76
KRH58745	Soybean	nucleus	74.6	62.6
KRH42643	Soybean	nucleus	74.44	62.55
VIT_01s0010g02550.t01	Wine grape	nucleus	69.17	57.43
GSMUA_Achr8P01120_001	Banana	nucleus	48.72	52.77
CDY01821	Canola	nucleus	56.39	50.65
AT1G67580.1	Thale cress	nucleus	59.58	49.6
Bra004236.1-P	Field mustard	nucleus	56.07	49.51
CDX96081	Canola	nucleus	56.07	49.51
GSMUA_Achr8P08900_001	Banana	nucleus	51.28	49.46
GSMUA_Achr5P25400_001	Banana	nucleus	54.31	48.71
GSMUA_Achr11P...	Banana	nucleus	54.15	48.57
EES12419	Sorghum	nucleus	52.88	47.83
Zm00001d003222_P016	Maize	nucleus	52.88	47.42
Os04t0488000-01	Rice	nucleus	53.67	47.32
PGSC0003DMT400044987	Potato	nucleus	59.9	47.05
Solyc05g014760.2.1	Tomato	nucleus	59.74	46.23
TraesCS2D01G345200.4	Wheat	nucleus	53.19	45.87
KRH57208	Soybean	cytosol	15.5	45.75
TraesCS2A01G346500.1	Wheat	nucleus	53.04	45.73
PGSC0003DMT400034649	Potato	nucleus	59.74	45.55
TraesCS2B01G364800.5	Wheat	nucleus	53.19	45.31
Zm00001d025739_P006	Maize	nucleus	51.6	44.86
HORVU2Hr1G084400.1	Barley	nucleus	53.19	44.22
TraesCS6A01G214100.1	Wheat	nucleus	47.44	44.0
TraesCS6B01G244100.1	Wheat	nucleus	46.96	43.95
Os02t0602100-02	Rice	nucleus	48.4	43.72
TraesCS6D01G196700.1	Wheat	nucleus	47.12	43.7
HORVU6Hr1G054600.5	Barley	nucleus	46.96	43.3
EES05381	Sorghum	nucleus	46.33	42.96
Zm00001d017128_P002	Maize	nucleus	45.53	42.92
KRH03917	Soybean	nucleus	38.82	42.48
KRH57202	Soybean	nucleus	38.98	42.36
KRH11866	Soybean	cytosol, nucleus	18.85	40.14
KRH36887	Soybean	cytosol, nucleus	18.69	39.8
KRH42252	Soybean	cytosol	18.21	38.78
KRH58370	Soybean	cytosol	18.21	38.0
KRH06014	Soybean	cytosol	18.69	37.26
KRH37522	Soybean	cytosol	18.69	36.91
KRH59626	Soybean	cytosol	18.21	36.77
KRH48128	Soybean	cytosol	18.21	36.19
KRH17547	Soybean	cytosol	18.69	34.72
KRH47306	Soybean	cytosol, nucleus, plasma membrane	17.41	34.71
KRH57887	Soybean	cytosol	12.14	32.2
KRH13011	Soybean	cytosol	15.97	30.4
KRH44859	Soybean	cytosol	15.5	29.04
KRH41782	Soybean	cytosol, nucleus	16.29	28.1
KRH26046	Soybean	cytosol	13.1	27.8
KRH48600	Soybean	cytosol	16.45	25.69
KRH63972	Soybean	cytosol	18.37	24.89
KRH40974	Soybean	cytosol, nucleus	18.21	24.73
KRH39114	Soybean	nucleus	16.13	24.57
KRH60482	Soybean	cytosol	15.81	24.21
KRH66138	Soybean	cytosol	16.13	23.22
KRH07433	Soybean	cytosol	15.81	22.76
KRH76377	Soybean	cytosol	15.5	21.56
KRH39665	Soybean	cytosol	15.65	21.54
KRH07697	Soybean	nucleus	15.02	20.84
KRH07201	Soybean	cytosol	13.1	19.71

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100808571	MapMan:13.1.1.2.7	MapMan:18.4.3.1.7	Gene3D:3.30.200.20	EMBL:ACUP02010798
ncoils:Coil	EnsemblPlantsGene:GLYMA_18G008700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010468	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	UniProt:K7MPA6	EnsemblPlants:KRG97452	ProteinID:KRG97452	ProteinID:KRG97452.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF332	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295BFF9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:624556..633668

Molecular Weight (calculated)

70441.8 Da

IEP (calculated)

5.201

GRAVY (calculated)

-0.749

Length

626 amino acids

Sequence
(BLAST)

001: MAAGRHGGYR DNEFRDRESN FDVSRRVFNN NSRQEYDSMT NGSRDVVRVG SKDARDRIRL RQKDIREREA PNGSYLSKSD SGGSGGCSCG FGPRRCGFSV
101: KTMDREPGEL SSESGSDDDG IESGSQEKYC EVATSEGNCA RSPLERKRKF SPIVWDQDDN EVNNLSKLRV VTAVTTLPPL PRVRLSPNVP DRGVETHPVK
201: HTEAEILELP TVTNPPLLSE SDQDAESESP VGLHSLLPDQ EAKRPEGEDY IPTHNISSSR WAAGDNSPGD EGEINDDKEI LKRRKLSPEL GMRVRNRMSR
301: LEESNIEDFV GARAKSSESK ERGSRGRLSS GDYCPGNMSR KDDYMEIDGQ GSRSEASGYH SDTDLEDDSR ETSEPPVPPQ RVANMLQGCR SVDEFERLNK
401: IDEGTYGVVF RAKDKKTDEI VALKKVKMEK EKEGFPLTSL REINILLSFH HPSIVDVKEV VVGSNLDSIF MVMEYMEHDL KGLMEAMKQP FSQSEVKCLM
501: LQLLEGVKYL HGNWVLHRDL KTSNLLLNNR GELKICDFGL ARQYGSPLKP YTHLVVTLWY RAPELLLGTK QYSTAIDMWS LGCIMAELLS KEPLFNGRTE
601: FEQLDKIFRI LGTPNETIWP GFSELP

Best Arabidopsis Sequence Match ( AT1G67580.1 )
(BLAST)

001: MAAGRNIRYP DHELRDQESN SRFSRRDSAY ANEDYNHVRN GAIDNGKGRV SNLRHGDRDR IKSGARQEEN KMVSSGFRLS KSNPGSREVF IDLGPKRCGF
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAG1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.