CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90996	nucleus
KRG91429
KRG99255	endoplasmic reticulum
KRG99448	nucleus
KRH04529	nucleus
KRH04631	nucleus
KRH05060	nucleus
KRH16044	nucleus
KRH28363	nucleus
KRH28424	nucleus
KRH28480	nucleus
KRH35393
KRH35760	nucleus
KRH44391	nucleus
KRH45568	nucleus
KRH45743	endoplasmic reticulum
KRH47513	nucleus
KRH50258	nucleus
KRH52524	nucleus
KRH57804	nucleus
KRH57973	nucleus
KRH61850	nucleus
KRH69476	endoplasmic reticulum
KRH69654	nucleus
KRH71159	nucleus
KRH74510	nucleus
KRH74675	endoplasmic reticulum
KRH76992	nucleus
KRH77050	nucleus
KRH77118	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63610.1	KRH44391	AT1G15570.1	20407024
AT5G63610.1	KRH47513	AT1G15570.1	20407024
AT5G63610.1	KRG99255	AT1G70210.1	20407024
AT5G63610.1	KRH45743	AT1G70210.1	20407024
AT5G63610.1	KRH69476	AT1G70210.1	20407024
AT5G63610.1	KRH74675	AT1G70210.1	20407024
AT5G63610.1	KRH04631	AT3G19150.1	20407024
AT5G63610.1	KRH28480	AT3G19150.1	20407024
AT5G63610.1	KRH50258	AT3G19150.1	20407024
AT5G63610.1	KRH57804	AT3G19150.1	20407024
AT5G63610.1	KRH71159	AT3G19150.1	20407024
AT5G63610.1	KRH76992	AT3G19150.1	20407024
AT5G63610.1	KRH04529	AT3G50070.1	20407024
AT5G63610.1	KRH28424	AT3G50070.1	20407024
AT5G63610.1	KRH57973	AT3G50070.1	20407024
AT5G63610.1	KRH77050	AT3G50070.1	20407024
AT5G63610.1	KRG90996	AT4G34160.1	20407024
AT5G63610.1	KRH35760	AT4G34160.1	20407024
AT5G63610.1	KRH28363	AT4G37630.1	20407024
AT5G63610.1	KRH77118	AT4G37630.1	20407024
AT5G63610.1	KRG99448	AT5G10440.1	20407024
AT5G63610.1	KRH45568	AT5G10440.1	20407024
AT5G63610.1	KRH69654	AT5G10440.1	20407024
AT5G63610.1	KRH74510	AT5G10440.1	20407024
AT5G63610.1	KRH05060	AT5G11300.1	20407024
AT5G63610.1	KRH16044	AT5G11300.1	20407024
AT5G63610.1	KRH52524	AT5G11300.1	20407024
AT5G63610.1	KRH61850	AT5G11300.1	20407024
AT5G63610.1	KRG91429	AT5G51910.1	21798944
AT5G63610.1	KRH35393	AT5G51910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59626	Soybean	cytosol	78.81	60.0
Solyc12g027870.1.1	Tomato	cytosol	71.19	50.0
KRH40974	Soybean	cytosol, nucleus	78.39	40.13
KRH63972	Soybean	cytosol	74.15	37.88
GSMUA_Achr11P...	Banana	cytosol	71.61	36.27
GSMUA_Achr5P18030_001	Banana	cytosol	70.76	35.76
TraesCS1D01G201600.1	Wheat	cytosol	71.19	35.74
HORVU1Hr1G051380.3	Barley	cytosol	71.19	35.74
TraesCS1A01G198100.2	Wheat	cytosol	71.19	35.74
TraesCS1B01G212800.1	Wheat	cytosol	70.76	35.53
VIT_07s0031g02680.t01	Wine grape	cytosol	72.03	35.34
Os10t0580300-01	Rice	cytosol, plasma membrane	70.76	35.16
Zm00001d014438_P001	Maize	cytosol	69.92	35.03
OQU92050	Sorghum	cytosol	69.92	35.03
Bra037748.1-P	Field mustard	cytosol	68.22	34.4
CDY60036	Canola	cytosol	68.22	34.4
AT5G63610.1	Thale cress	cytosol	68.22	34.26
CDX81189	Canola	cytosol, nucleus, plastid	58.9	31.95
KRH36887	Soybean	cytosol, nucleus	33.9	27.21
KRH11866	Soybean	cytosol, nucleus	33.9	27.21
KRH42252	Soybean	cytosol	33.9	27.21
KRH58370	Soybean	cytosol	33.05	26.0
KRH47306	Soybean	cytosol, nucleus, plasma membrane	33.05	24.84
KRH37522	Soybean	cytosol	32.63	24.29
KRH48128	Soybean	cytosol	32.2	24.13
KRH06014	Soybean	cytosol	31.36	23.57
KRH17547	Soybean	cytosol	31.78	22.26
KRH57208	Soybean	cytosol	19.49	21.7
KRH41782	Soybean	cytosol, nucleus	32.63	21.21
KRH13011	Soybean	cytosol	28.81	20.67
KRH26046	Soybean	cytosol	25.42	20.34
KRH44859	Soybean	cytosol	27.97	19.76
KRH60482	Soybean	cytosol	32.2	18.58
KRH48600	Soybean	cytosol	30.93	18.2
KRH39114	Soybean	nucleus	30.93	17.76
KRH66138	Soybean	cytosol	28.81	15.63
KRH07433	Soybean	cytosol	28.39	15.4
KRH39665	Soybean	cytosol	29.24	15.16
KRH76377	Soybean	cytosol	28.81	15.11
KRH07697	Soybean	nucleus	28.39	14.86
KRH07201	Soybean	cytosol	25.85	14.66
KRH57202	Soybean	nucleus	31.78	13.02
KRH03917	Soybean	nucleus	31.36	12.94
KRG97452	Soybean	nucleus	32.2	12.14
KRH42643	Soybean	nucleus	33.47	10.6
KRH58745	Soybean	nucleus	33.47	10.59
KRH31446	Soybean	nucleus	32.63	10.38

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A0R0K3C7	EMBL:ACUP02003068	EnsemblPlantsGene:GLYMA_05G090300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH57887	ProteinID:KRH57887	ProteinID:KRH57887.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF92	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0006ED89F2	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:20243712..20246416

Molecular Weight (calculated)

27504.5 Da

IEP (calculated)

9.619

GRAVY (calculated)

-0.162

Length

236 amino acids

Sequence
(BLAST)

001: MNDTNRWTTT LDIWSSKIGE GTYDLIFLVR TESPAVTHSK FVGIKKFKQS KDGNDISPTA IREIMLLKKI THENVVKLIN IHINHVNMSL YLAFNYVEHN
101: LYEIIRHHMD KLNHSINQYT IKSLLWQLLN GLSYLHRDTN MQVVVTIWYR APELLLGAKH YTSVVDMWAV GCIFAQFLTL KPLFQGVEVK ATSNPFQLDK
201: LDKIFKILDH LTLEKWSSLA SLPHWQQDVR HIQGHK

Best Arabidopsis Sequence Match ( AT5G63610.1 )
(BLAST)

001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL

Arabidopsis Description

CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.