Factsheet for Bra037748.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001736.1-P	nucleus
Bra007901.1-P	endoplasmic reticulum
Bra008973.1-P	nucleus
Bra009031.1-P	nucleus
Bra011501.1-P	nucleus
Bra012894.1-P	nucleus
Bra012909.1-P	nucleus
Bra016654.1-P	nucleus
Bra017629.1-P	nucleus
Bra017840.1-P	nucleus
Bra022391.1-P	nucleus
Bra022568.1-P
Bra026120.1-P	nucleus
Bra026756.1-P	nucleus
Bra029992.1-P	nucleus
Bra034612.1-P	nucleus
Bra036095.1-P	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63610.1	Bra016654.1-P	AT1G15570.1	20407024
AT5G63610.1	Bra026120.1-P	AT1G15570.1	20407024
AT5G63610.1	Bra026756.1-P	AT1G15570.1	20407024
AT5G63610.1	Bra007901.1-P	AT1G70210.1	20407024
AT5G63610.1	Bra001736.1-P	AT3G19150.1	20407024
AT5G63610.1	Bra022391.1-P	AT3G19150.1	20407024
AT5G63610.1	Bra012909.1-P	AT3G50070.1	20407024
AT5G63610.1	Bra029992.1-P	AT3G50070.1	20407024
AT5G63610.1	Bra012894.1-P	AT3G50630.1	20407024
AT5G63610.1	Bra036095.1-P	AT3G50630.1	20407024
AT5G63610.1	Bra011501.1-P	AT4G34160.1	20407024
AT5G63610.1	Bra017629.1-P	AT4G34160.1	20407024
AT5G63610.1	Bra034612.1-P	AT4G34160.1	20407024
AT5G63610.1	Bra017840.1-P	AT4G37630.1	20407024
AT5G63610.1	Bra009031.1-P	AT5G10440.1	20407024
AT5G63610.1	Bra008973.1-P	AT5G11300.1	20407024
AT5G63610.1	Bra022568.1-P	AT5G51910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60036	Canola	cytosol	99.79	99.79
CDX81189	Canola	cytosol, nucleus, plastid	92.31	99.31
AT5G63610.1	Thale cress	cytosol	93.8	93.4
KRH59626	Soybean	cytosol	55.77	84.19
Solyc12g027870.1.1	Tomato	cytosol	60.04	83.63
KRH40974	Soybean	cytosol, nucleus	75.64	76.79
KRH63972	Soybean	cytosol	75.43	76.41
VIT_07s0031g02680.t01	Wine grape	cytosol	76.07	74.01
TraesCS1D01G201600.1	Wheat	cytosol	73.93	73.62
TraesCS1A01G198100.2	Wheat	cytosol	73.93	73.62
HORVU1Hr1G051380.3	Barley	cytosol	73.72	73.4
TraesCS1B01G212800.1	Wheat	cytosol	73.72	73.4
GSMUA_Achr11P...	Banana	cytosol	73.08	73.39
OQU92050	Sorghum	cytosol	73.72	73.25
Os10t0580300-01	Rice	cytosol, plasma membrane	73.93	72.84
GSMUA_Achr5P18030_001	Banana	cytosol	72.44	72.59
Zm00001d014438_P001	Maize	cytosol	72.86	72.4
KRH57887	Soybean	cytosol	34.4	68.22
Bra018036.1-P	Field mustard	cytosol	30.13	47.96
Bra029917.1-P	Field mustard	cytosol	30.34	45.51
Bra014835.1-P	Field mustard	cytosol	26.92	41.45
Bra012258.1-P	Field mustard	cytosol	27.35	40.51
Bra000077.1-P	Field mustard	cytosol, nucleus, plasma membrane	26.92	40.38
Bra015735.1-P	Field mustard	cytosol	26.5	39.62
Bra029230.1-P	Field mustard	cytosol, mitochondrion	27.14	38.72
Bra016572.1-P	Field mustard	cytosol	30.13	35.88
Bra015974.1-P	Field mustard	cytosol	30.34	35.77
Bra031013.1-P	Field mustard	cytosol	28.63	35.54
Bra025077.1-P	Field mustard	cytosol	25.64	27.78
Bra020977.1-P	Field mustard	cytosol	26.5	26.9
Bra038825.1-P	Field mustard	cytosol	22.65	24.48
Bra019550.1-P	Field mustard	nucleus	27.78	23.34
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	26.28	21.69
Bra021977.1-P	Field mustard	cytosol	16.24	21.41
Bra004236.1-P	Field mustard	nucleus	30.77	20.31

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.5	MapMan:15.3.3.4.3	MapMan:18.4.3.1.5	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra037748
EnsemblPlants:Bra037748.1	EnsemblPlants:Bra037748.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M4F9I5	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002541A63	SEG:seg	:	:

Description

AT5G63610 (E=1e-234) HEN3, CDKE;1, ATCDK8 | CDKE;1 (CYCLIN-DEPENDENT KINASE E;1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA09:-:3387466..3388872

Molecular Weight (calculated)

52643.3 Da

IEP (calculated)

9.641

GRAVY (calculated)

-0.485

Length

468 amino acids

Sequence
(BLAST)

001: MGDGSSTRSN SSNSSNSEKP EWLQQYNLVG KIGEGTYGLV FLARTKTQPK RPIAIKKFKQ SKDGDGVSPT AIREIMLLRE ISHENVVKLF NVHINFADMS
101: LYLAFDYAEY DLYEIIRHHR DKVGHSLNQY TVKSLLWQLL NGLNYLHSNW IIHRDLKPSN ILVMGEGEEH GIMKIADFGL ARIFQAPLKP LSDNGVVVTI
201: WYRAPELLLG SKHYTSAVDM WAVGCIFAEL LTLKPLFQGA EAKSSQNPFQ VDQLDKIFKI LGHPTVDKWP TLANLPHWQS DLQHIQAHKY DSAGLHNVVH
301: LNLKSPAYDL LSKMLEYDPL KRITASQALE HEYFRMEPLP GRNAFVASQP MEKNVNYPTR PVDTNTDFEG TTSINPPQGV AAGNVPGGHG MGSRSMPRPM
401: VAHNMQRMQP QGGVMAYNFP AQAGMNPSVP MQQRGMAQPH QQQQQQLRRK DPGMGMSGYA PPNKNRRL

Best Arabidopsis Sequence Match ( AT5G63610.1 )
(BLAST)

001: MGDGSSSRSN SSNSTSEKPE WLQQYNLVGK IGEGTYGLVF LARTKTPPKR PIAIKKFKQS KDGDGVSPTA IREIMLLREI SHENVVKLVN VHINFADMSL
101: YLAFDYAEYD LYEIIRHHRD KVGHSLNTYT VKSLLWQLLN GLNYLHSNWI IHRDLKPSNI LVMGDAEEHG IVKIADFGLA RIYQAPLKPL SDNGVVVTIW
201: YRAPELLLGS KHYTSAVDMW AVGCIFAELL TLKPLFQGAE AKSSQNPFQL DQLDKIFKIL GHPTMDKWPT LVNLPHWQND VQHIQAHKYD SVGLHNVVHL
301: NQKSPAYDLL SKMLEYDPLK RITASQALEH EYFRMDPLPG RNAFVASQPM EKNVNYPTRP VDTNTDFEGT TSINPPQAVA AGNVAGNMAG AHGMGSRSMP
401: RPMVAHNMQR MQQSQGMMAY NFPAQAGLNP SVPLQQQRGM AQPHQQQQLR RKDPGMGMSG YAPPNKSRRL

Arabidopsis Description

CDKE-1Cyclin-dependent kinase E-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84TI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.