Factsheet for Bra015974.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003438.1-P
Bra005565.1-P	nucleus
Bra007576.1-P
Bra007901.1-P	nucleus
Bra008973.1-P	nucleus
Bra009031.1-P	nucleus
Bra016460.1-P	nucleus
Bra016640.1-P
Bra016654.1-P	nucleus
Bra017840.1-P	nucleus
Bra021808.1-P	nucleus
Bra022897.1-P	nucleus
Bra025831.1-P	nucleus
Bra026065.1-P
Bra026120.1-P	nucleus
Bra026756.1-P	nucleus
Bra034198.1-P	nucleus
Bra034380.1-P	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73690.1	Bra016654.1-P	AT1G15570.1	20407024
AT1G73690.1	Bra026120.1-P	AT1G15570.1	20407024
AT1G73690.1	Bra026756.1-P	AT1G15570.1	20407024
AT1G73690.1	Bra016640.1-P	AT1G16330.1	20407024
AT1G73690.1	Bra026065.1-P	AT1G16330.1	20407024
AT1G73690.1	Bra016460.1-P	AT1G20610.1	20407024
AT1G73690.1	Bra025831.1-P	AT1G20610.1	20407024
AT1G73690.1	Bra007901.1-P	AT1G70210.1	20407024
AT1G73690.1	Bra034380.1-P	AT2G27970.1	20407024
AT1G73690.1	Bra005565.1-P	AT2G32710.1	20407024
AT1G73690.1	Bra021808.1-P	AT2G32710.1	20407024
AT1G73690.1	Bra022897.1-P	AT2G32710.1	20407024
AT1G73690.1	Bra003438.1-P	AT3G61140.1	20706207
AT1G73690.1	Bra007576.1-P	AT3G61140.1	20706207
AT1G73690.1	Bra034198.1-P	AT4G03270.1	20407024
AT1G73690.1	Bra017840.1-P	AT4G37630.1	20407024
AT1G73690.1	Bra009031.1-P	AT5G10440.1	20407024
AT1G73690.1	Bra008973.1-P	AT5G11300.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60132	Canola	cytosol	97.98	97.98
AT1G73690.1	Thale cress	cytosol	87.66	87.44
Bra016572.1-P	Field mustard	cytosol	81.61	82.44
Bra031013.1-P	Field mustard	cytosol	77.08	81.17
KRH41782	Soybean	cytosol, nucleus	67.25	73.55
KRH39114	Soybean	nucleus	73.8	71.29
KRH48600	Soybean	cytosol	71.54	70.82
KRH60482	Soybean	cytosol	72.54	70.42
VIT_14s0006g02280.t01	Wine grape	cytosol	61.21	70.03
PGSC0003DMT400032131	Potato	cytosol	70.78	67.06
Solyc08g081280.2.1	Tomato	cytosol, nucleus	70.53	66.83
TraesCS1D01G245300.1	Wheat	cytosol	68.51	64.15
TraesCS1B01G256600.1	Wheat	cytosol	68.51	64.15
TraesCS1A01G245600.1	Wheat	cytosol	68.51	64.15
HORVU1Hr1G062980.2	Barley	cytosol	68.51	64.0
Zm00001d010476_P001	Maize	cytosol	66.75	61.92
EES18176	Sorghum	cytosol	66.5	61.68
Zm00001d038109_P002	Maize	cytosol	64.99	60.0
GSMUA_Achr3P09020_001	Banana	cytosol	70.28	59.11
GSMUA_Achr9P17590_001	Banana	cytosol	69.77	55.29
Bra018036.1-P	Field mustard	cytosol	36.27	48.98
Bra029917.1-P	Field mustard	cytosol	36.52	46.47
Bra014835.1-P	Field mustard	cytosol	31.49	41.12
Bra015735.1-P	Field mustard	cytosol	32.24	40.89
Bra012258.1-P	Field mustard	cytosol	32.24	40.51
Bra000077.1-P	Field mustard	cytosol, nucleus, plasma membrane	31.74	40.38
Bra029230.1-P	Field mustard	cytosol, mitochondrion	30.23	36.59
Bra037748.1-P	Field mustard	cytosol	35.77	30.34
Bra025077.1-P	Field mustard	cytosol	29.22	26.85
Bra020977.1-P	Field mustard	cytosol	30.48	26.25
Bra038825.1-P	Field mustard	cytosol	28.46	26.1
Bra019550.1-P	Field mustard	nucleus	31.74	22.62
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.72	20.81
Bra004236.1-P	Field mustard	nucleus	35.01	19.61
Bra021977.1-P	Field mustard	cytosol	17.13	19.15

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.4	MapMan:14.6.3.1.3	MapMan:15.3.5.6.2.2	MapMan:18.4.3.1.4	Gene3D:3.30.200.20
EnsemblPlantsGene:Bra015974	EnsemblPlants:Bra015974.1	EnsemblPlants:Bra015974.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4DHJ7	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF242	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002541D44	:	:	:	:

Description

AT1G73690 (E=1e-198) CDKD1;1, AT;CDKD;1, CAK3AT | CDKD1;1 (CYCLIN-DEPENDENT KINASE D1;1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA07:+:19995155..19996951

Molecular Weight (calculated)

45161.9 Da

IEP (calculated)

9.816

GRAVY (calculated)

-0.388

Length

397 amino acids

Sequence
(BLAST)

001: MVDQYSEMDK PKKVADRYLR QEVLGQGTYG VVFKATDTKN GQTVAIKKIR LGKEKEGVNI TALREIKLLK ELKHPHIIEL VDAFPHKENL HLVFEFMETD
101: LEAVIRDPNL FLSPADVKSY LQMTLKGLEY CHDKCVLHRD MKPNNLLIGP NGQLKLADFG LARIFGSPGR KFTHQVFTRW YRAPELLFGS KHYGSAVDVW
201: AVGCIFAELL LRKPFLQGKS DIDQLSKIFA AFGTPKEDQW PDMLSLPDYV EYQFVPGASL RSLFPMVSED GLDLLSKMFT YDPKSRISIQ QALNHRYFTS
301: APSPTDPLKL PRPVRKQDAK SSESKLKTIT VLSPAHKLRR VMPDRGKSTD VMKQASHDGQ APMSLDFTIL AERPPNRLTI TSADRSNLKR KLDLEFM

Best Arabidopsis Sequence Match ( AT1G73690.1 )
(BLAST)

001: MEQPKKVADR YLKREVLGQG TYGVVFKATD TKNGETVAIK KIRLGKEKEG VNVTALREIK LLKELKHPHI IELIDAFPHK ENLHIVFEFM ETDLEAVIRD
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL

Arabidopsis Description

CDKD-1Cyclin-dependent kinase D-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.