CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX67853
CDX69768	nucleus
CDX69832	nucleus
CDX72643	nucleus
CDX77145	nucleus
CDX79470	nucleus
CDX81722	nucleus
CDX83953
CDX84726	nucleus
CDX90892	nucleus
CDX96631	nucleus
CDX96819
CDX96836	nucleus
CDX97009	nucleus
CDX97090	nucleus
CDY11608	nucleus
CDY12181	nucleus
CDY19160	nucleus
CDY21951	nucleus
CDY22116	nucleus
CDY23793	nucleus
CDY29520	nucleus
CDY29570	nucleus
CDY30517	nucleus
CDY31481	nucleus
CDY33338
CDY33634	nucleus
CDY35083
CDY36574	nucleus
CDY38800	nucleus
CDY45683
CDY52333
CDY53304	nucleus
CDY59640	nucleus
CDY59943	nucleus
CDY65304
CDY66415	nucleus
CDY67142	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73690.1	CDX81722	AT1G15570.1	20407024
AT1G73690.1	CDX96836	AT1G15570.1	20407024
AT1G73690.1	CDY36574	AT1G15570.1	20407024
AT1G73690.1	CDY53304	AT1G15570.1	20407024
AT1G73690.1	CDY66415	AT1G15570.1	20407024
AT1G73690.1	CDX83953	AT1G16330.1	20407024
AT1G73690.1	CDX96819	AT1G16330.1	20407024
AT1G73690.1	CDY33338	AT1G16330.1	20407024
AT1G73690.1	CDY35083	AT1G16330.1	20407024
AT1G73690.1	CDX96631	AT1G20610.1	20407024
AT1G73690.1	CDY29520	AT1G20610.1	20407024
AT1G73690.1	CDY31481	AT1G20610.1	20407024
AT1G73690.1	CDY33634	AT1G20610.1	20407024
AT1G73690.1	CDY11608	AT1G70210.1	20407024
AT1G73690.1	CDY38800	AT1G70210.1	20407024
AT1G73690.1	CDY59943	AT1G70210.1	20407024
AT1G73690.1	CDY67142	AT1G70210.1	20407024
AT1G73690.1	CDX77145	AT2G27970.1	20407024
AT1G73690.1	CDY30517	AT2G27970.1	20407024
AT1G73690.1	CDX79470	AT2G32710.1	20407024
AT1G73690.1	CDX84726	AT2G32710.1	20407024
AT1G73690.1	CDY12181	AT2G32710.1	20407024
AT1G73690.1	CDY19160	AT2G32710.1	20407024
AT1G73690.1	CDY23793	AT2G32710.1	20407024
AT1G73690.1	CDY59640	AT2G32710.1	20407024
AT1G73690.1	CDX67853	AT3G61140.1	20706207
AT1G73690.1	CDY45683	AT3G61140.1	20706207
AT1G73690.1	CDY52333	AT3G61140.1	20706207
AT1G73690.1	CDY65304	AT3G61140.1	20706207
AT1G73690.1	CDX90892	AT4G03270.1	20407024
AT1G73690.1	CDY21951	AT4G03270.1	20407024
AT1G73690.1	CDY22116	AT4G03270.1	20407024
AT1G73690.1	CDX72643	AT4G37630.1	20407024
AT1G73690.1	CDY29570	AT4G37630.1	20407024
AT1G73690.1	CDX69832	AT5G10440.1	20407024
AT1G73690.1	CDX97009	AT5G10440.1	20407024
AT1G73690.1	CDX69768	AT5G11300.1	20407024
AT1G73690.1	CDX97090	AT5G11300.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015974.1-P	Field mustard	cytosol	97.98	97.98
CDX73001	Canola	cytosol	96.98	96.98
AT1G73690.1	Thale cress	cytosol	86.15	85.93
CDX96739	Canola	cytosol	80.86	81.68
CDY21722	Canola	cytosol	79.85	81.49
CDX81858	Canola	cytosol	79.09	80.72
CDX83876	Canola	cytosol	79.35	79.75
KRH41782	Soybean	cytosol, nucleus	67.0	73.28
KRH39114	Soybean	nucleus	73.8	71.29
KRH48600	Soybean	cytosol	71.54	70.82
KRH60482	Soybean	cytosol	72.8	70.66
VIT_14s0006g02280.t01	Wine grape	cytosol	60.71	69.45
CDY36228	Canola	cytosol	58.94	67.44
CDX96131	Canola	cytosol	58.94	67.44
PGSC0003DMT400032131	Potato	cytosol	70.78	67.06
Solyc08g081280.2.1	Tomato	cytosol, nucleus	70.53	66.83
TraesCS1D01G245300.1	Wheat	cytosol	67.76	63.44
TraesCS1A01G245600.1	Wheat	cytosol	67.76	63.44
TraesCS1B01G256600.1	Wheat	cytosol	67.76	63.44
HORVU1Hr1G062980.2	Barley	cytosol	67.76	63.29
Zm00001d010476_P001	Maize	cytosol	65.74	60.98
EES18176	Sorghum	cytosol	65.49	60.75
Zm00001d038109_P002	Maize	cytosol	64.23	59.3
GSMUA_Achr3P09020_001	Banana	cytosol	70.03	58.9
GSMUA_Achr9P17590_001	Banana	cytosol	69.52	55.09
CDX68497	Canola	cytosol	36.27	48.98
CDX83047	Canola	cytosol	36.52	46.47
CDX87018	Canola	cytosol	27.46	45.99
CDY66197	Canola	cytosol	36.27	42.6
CDY69065	Canola	cytosol	15.87	41.45
CDY45733	Canola	cytosol, plastid, vacuole	15.87	41.45
CDX88294	Canola	cytosol	32.49	41.21
CDX87588	Canola	cytosol	32.49	41.21
CDY13189	Canola	cytosol	31.49	41.12
CDX76164	Canola	cytosol	31.49	41.12
CDY62439	Canola	cytosol, nucleus, plasma membrane	31.99	40.97
CDY07716	Canola	cytosol	31.74	40.78
CDY01345	Canola	cytosol	31.99	40.19
CDY31856	Canola	cytosol	31.99	40.19
CDY05870	Canola	cytosol, plastid	36.27	37.99
CDX87784	Canola	cytosol	21.91	32.71
CDY60036	Canola	cytosol	35.77	30.34
CDX81189	Canola	cytosol, nucleus, plastid	32.24	29.43
CDY38979	Canola	cytosol	28.97	26.26
CDX76497	Canola	cytosol	30.23	26.03
CDY09272	Canola	cytosol	30.23	26.03
CDY01580	Canola	cytosol	30.23	26.03
CDY67496	Canola	cytosol	20.65	25.95
CDY39427	Canola	cytosol	30.23	25.0
CDY13047	Canola	cytosol	28.97	24.73
CDY49306	Canola	cytosol	28.97	24.06
CDY37922	Canola	nucleus	30.23	22.64
CDY56886	Canola	nucleus	27.71	21.48
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	29.47	20.78
CDY01821	Canola	nucleus	35.01	19.94
CDX96081	Canola	nucleus	35.26	19.75
CDY26373	Canola	mitochondrion	1.01	4.49
CDX87783	Canola	extracellular, mitochondrion	1.01	3.39

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.4	MapMan:14.6.3.1.3	MapMan:15.3.5.6.2.2	MapMan:18.4.3.1.4	Gene3D:3.30.200.20
GO:A0A078J924	UniProt:A0A078J924	EnsemblPlants:CDY60132	ProteinID:CDY60132	ProteinID:CDY60132.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00028225001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF242
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE7BA5
SEG:seg	:	:	:	:	:

Description

BnaA07g38990DBnaA07g38990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J924]

Coordinates

chrLK033847:+:11113..12841

Molecular Weight (calculated)

45096.8 Da

IEP (calculated)

9.731

GRAVY (calculated)

-0.376

Length

397 amino acids

Sequence
(BLAST)

001: MVDQYSEMDK PKKVADRYLR QEVLGQGTYG VVFKATDTKN GQTVAIKKIR LGKEKEGVNI TALREIKLLK ELKHPHIIEL VDAFPHKENL HLVFEFMETD
101: LEAVIRDPNL FLSPADVKSY LQMTLKGLEY CHDKCVLHRD MKPNNLLIGP NGQLKLADFG LARIFGSPGR KFTHQVFTRW YRAPELLFGS KHYGSAVDVW
201: AVGCIFAELL LRKPFLQGKS DIDQLSKIFA AFGTPKEDQW PDMLSLPDYV EYQFVPGASL LSSFPMVSDD GLDLLSKMFT YDPKSRISIH QALQHRYFTS
301: APSPTDPLKL PRPVHKKEAK SSESKLKTIT VLSPAHKLRR VMPDRGKSTD VMKQASHDGQ APMSLDFTIL AERPPNRLTI TSADRSNLKR KLDLEFM

Best Arabidopsis Sequence Match ( AT1G73690.1 )
(BLAST)

001: MEQPKKVADR YLKREVLGQG TYGVVFKATD TKNGETVAIK KIRLGKEKEG VNVTALREIK LLKELKHPHI IELIDAFPHK ENLHIVFEFM ETDLEAVIRD
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL

Arabidopsis Description

CDKD-1Cyclin-dependent kinase D-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.