CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019550.1-P	Field mustard	nucleus	100.0	95.15
CDY56886	Canola	nucleus	90.75	93.95
CDY45733	Canola	cytosol, plastid, vacuole	17.92	62.5
CDY69065	Canola	cytosol	17.74	61.84
PGSC0003DMT400086876	Potato	cytosol	34.15	57.46
PGSC0003DMT400092022	Potato	cytosol	23.02	56.22
CDX68497	Canola	cytosol	23.96	43.2
CDX87018	Canola	cytosol	18.49	41.35
CDX83047	Canola	cytosol	23.96	40.71
CDY13189	Canola	cytosol	22.64	39.47
CDX76164	Canola	cytosol	22.64	39.47
CDY07716	Canola	cytosol	22.45	38.51
CDY62439	Canola	cytosol, nucleus, plasma membrane	22.45	38.39
CDY66197	Canola	cytosol	24.15	37.87
CDY31856	Canola	cytosol	22.45	37.66
CDY01345	Canola	cytosol	22.45	37.66
CDY01821	Canola	nucleus	48.49	36.87
CDX88294	Canola	cytosol	21.7	36.74
CDX87588	Canola	cytosol	21.7	36.74
CDX96081	Canola	nucleus	48.87	36.53
CDY05870	Canola	cytosol, plastid	24.72	34.56
CDX87784	Canola	cytosol	16.79	33.46
CDX96131	Canola	cytosol	21.89	33.43
CDY36228	Canola	cytosol	21.89	33.43
CDX96739	Canola	cytosol	22.83	30.79
CDX73001	Canola	cytosol	23.02	30.73
CDY60132	Canola	cytosol	22.64	30.23
CDX83876	Canola	cytosol	22.45	30.13
CDY21722	Canola	cytosol	22.08	30.08
CDX81858	Canola	cytosol	21.7	29.56
CDY60036	Canola	cytosol	23.96	27.14
CDX81189	Canola	cytosol, nucleus, plastid	21.89	26.67
CDY49306	Canola	cytosol	23.02	25.52
CDY38979	Canola	cytosol	20.57	24.89
CDY09272	Canola	cytosol	20.94	24.08
CDX76497	Canola	cytosol	20.75	23.86
CDY01580	Canola	cytosol	20.38	23.43
CDY67496	Canola	cytosol	13.96	23.42
CDY13047	Canola	cytosol	20.38	23.23
CDY39427	Canola	cytosol	20.75	22.92
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	20.57	19.36
CDX87783	Canola	extracellular, mitochondrion	0.19	0.85
CDY26373	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.7	MapMan:18.4.3.1.7	Gene3D:3.30.200.20	GO:A0A078HJ80	UniProt:A0A078HJ80
EnsemblPlants:CDY37922	ProteinID:CDY37922	ProteinID:CDY37922.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00064925001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF332	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDB8D4
SEG:seg	:	:	:	:	:

Description

BnaA06g18950DBnaA06g18950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJ80]

Coordinates

chrLK032411:+:278051..280972

Molecular Weight (calculated)

59770.7 Da

IEP (calculated)

4.990

GRAVY (calculated)

-0.575

Length

530 amino acids

Sequence
(BLAST)

001: MAAGGVEISK SSVVVDRVRD LYPRQGGRDG ERRQTKRPSD SDRWLKDGRR DLYQRGEARE GDVGQKRRKC SPVSGERKDQ VFPPPLGEKT IVDVGKISSE
101: GVVKSTEYVS AVSVTSVKHP FDDLEEGQLE DEQVVQAPNI ATSKWCLESP KDEAVHVVRN SRWNRSSLTP ESGEFQVDSS DERRSNSSES RSLEPLSSHE
201: NSEHEINMDV GEEECCASDL NDSEVDEAEG GLSMLSGSRD VNEYQKLSKI NEGTYGVVYK AKDRKTEEIV ALKMIKMNME DEYGFPLTSL REINILLSCN
301: HPSIVNVKEV VVGNGDSVFM VMEHLEHDLR GVMDRMKQPF STSEVKCLMI QLLEGLKYLH SNWIIHRDLK PSNLLLNNSG ELKICDFGMA RQYGSPIKPY
401: TQLVVTQWYR SPELLLGTKE YSTAVDMWSI GCIMGELLSL KPLFRGKSQN DIDQLQQIFA VLGTPSETTW PGFTSLPVLS ELGFDLLNRL LNVDPEKRLT
501: VDEALNHAWF NEVPLQKSKE FMPTFPSKRN

Best Arabidopsis Sequence Match ( AT5G63370.7 )
(BLAST)

001: MAAGGVDVSR SSVAVKKDYD FYRNGSRDVY VRQSGRDDER RQIKRPSDHD LRRNDGRHRS RLAYEKGELR EEAEVQRPSE KRRKFSPIVW NAEKVGRAPS
101: REKTKSPFPV PTTTVISNQA VAGKTTSNDQ VNALMSPEPS YLAPVQPSEA LLAVKHPVDD LEEGQLEEEQ VMQEDVKEGL LEEEQVMQEP NIKTSRWGTG
201: LTSPKEELIS VNVSKTNRWN RSSLTPECEE VMVSEEQQCY SSGSGSGHLS VEKLSADGNS GREYYSSDHD ELEHEDQDSL TPGEMNMMFG SRSVNEFQKL
301: NKINEGTYGI VYKARDEKTK EIVALKKIKM KEDRFEEEYG FPLTSLREIN ILLSCNHPAI VNVKEVVVGG KNDNDVYMVM EHLEHDLRGV MDRRKEPFST
401: SEVKCLMMQL LDGLKYLHTN WIIHRDLKPS NLLMNNCGEL KICDFGMARQ YGSPIKPYTQ MVITQWYRPP ELLLGAKEYS TAVDMWSVGC IMAELLSQKP
501: LFPGKSELDQ LQKIFAVLGT PNEAIWPGFS SFPNAKAKFP TQPYNMLRKK FPAISFVGGQ ILSERGFDLL NSLLTLDPEK RLTVEDALNH GWFHEVPLPK
601: SKDFMPTYPP KR

Arabidopsis Description

CDKG1Cyclin-dependent kinase G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGW5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.