CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87783	Canola	extracellular, mitochondrion	97.75	73.73
CDY13047	Canola	cytosol	55.06	10.54
CDY38979	Canola	cytosol	47.19	9.59
CDY39427	Canola	cytosol	48.31	8.96
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	55.06	8.7
CDY09272	Canola	cytosol	32.58	6.29
CDY01580	Canola	cytosol	31.46	6.07
CDX76497	Canola	cytosol	31.46	6.07
CDY49306	Canola	cytosol	7.87	1.46
CDX81189	Canola	cytosol, nucleus, plastid	6.74	1.38
CDX81858	Canola	cytosol	5.62	1.29
CDY21722	Canola	cytosol	5.62	1.29
CDY60036	Canola	cytosol	6.74	1.28
CDX96739	Canola	cytosol	5.62	1.27
CDX83876	Canola	cytosol	5.62	1.27
CDX73001	Canola	cytosol	4.49	1.01
CDY60132	Canola	cytosol	4.49	1.01
CDY01821	Canola	nucleus	3.37	0.43
CDX96081	Canola	nucleus	3.37	0.42
CDY45733	Canola	cytosol, plastid, vacuole	0.0	0.0
CDY56886	Canola	nucleus	0.0	0.0
CDY69065	Canola	cytosol	0.0	0.0
CDY62439	Canola	cytosol, nucleus, plasma membrane	0.0	0.0
CDY66197	Canola	cytosol	0.0	0.0
CDY67496	Canola	cytosol	0.0	0.0
CDX68497	Canola	cytosol	0.0	0.0
CDY37922	Canola	nucleus	0.0	0.0
CDY36228	Canola	cytosol	0.0	0.0
CDY31856	Canola	cytosol	0.0	0.0
CDY13189	Canola	cytosol	0.0	0.0
CDY07716	Canola	cytosol	0.0	0.0
CDY05870	Canola	cytosol, plastid	0.0	0.0
CDY01345	Canola	cytosol	0.0	0.0
CDX96131	Canola	cytosol	0.0	0.0
CDX88294	Canola	cytosol	0.0	0.0
CDX87784	Canola	cytosol	0.0	0.0
CDX87588	Canola	cytosol	0.0	0.0
CDX87018	Canola	cytosol	0.0	0.0
CDX83047	Canola	cytosol	0.0	0.0
CDX76164	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY26373	EnsemblPlantsGene:GSBRNA2T00035133001	ProteinID:CDY26373	ProteinID:CDY26373.1	SEG:seg	UniParc:UPI0004EE1263
UniProt:A0A078GNX9	MapMan:35.2	:	:	:	:

Description

BnaA02g23970DBnaA02g23970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNX9]

Coordinates

chrLK032189:-:210033..210381

Molecular Weight (calculated)

10102.4 Da

IEP (calculated)

11.714

GRAVY (calculated)

-0.338

Length

89 amino acids

Sequence
(BLAST)

1: MVLLLALVRP SGIWRQHGTT KPWEVIMSEM LSIYHRLEGR VLAMVGGGRW SQSQRQQQPV MKAGWVGESG DMFLRPTQPP NPYSRRIAG

Best Arabidopsis Sequence Match ( AT5G45430.1 )
(BLAST)

001: MERYTLLKEV GDGTFGNVWR AVNKQTNEVV AIKRMKKKYF SWEECVNLRE VKSLSRMNHP NIVKLKEVIR ENDILYFVFE YMECNLYQLM KDRPKHFAES
101: DIRNWCFQVF QGLSYMHQRG YFHRDLKPEN LLVSKDVIKI ADLGLAREID SSPPYTEYVS TRWYRAPEVL LQSYVYTSKV DMWAMGAIMA ELLSLRPLFP
201: GASEADEIYK ICSVIGSPTE ETWLEGLNLA SVINYQFPQF PGVHLSSVMP YASADAVNLI ERLCSWDPCN RPTTAEALQH PFFQSCYYIP PSLRPKLSEP
301: RGSLEQQQSV KRLPAAPTYN ANKPLNTYVT PKTNAPFSNG VNSYVTPKTN APFSNGVNSY VTAKTNAPFS NGVNNYVAPK MNAPFDNGAT QQKVDTTNNN
401: NQNTAWNNKP VRSYNVKDSK YRPPGRKSPL AASMEKNWVF SRGASETANK LANATIGGRW TQSQRQQQPA MKAGWVGESG DMFLRPTQPS NPYSRKIAG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8H0X4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.