Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX67944 | nucleus |
| CDX69768 | nucleus |
| CDX72643 | nucleus |
| CDX77145 | nucleus |
| CDX77932 | nucleus |
| CDX79389 | nucleus |
| CDX79470 | nucleus |
| CDX81722 | nucleus |
| CDX82309 | nucleus |
| CDX84726 | nucleus |
| CDX85466 | nucleus |
| CDX87305 | nucleus |
| CDX90892 | nucleus |
| CDX92305 | nucleus |
| CDX93038 | nucleus |
| CDX93296 | nucleus |
| CDX96631 | nucleus |
| CDX96836 | nucleus |
| CDX97090 | nucleus |
| CDX99264 | nucleus |
| CDY02078 | nucleus |
| CDY02719 | nucleus |
| CDY12181 | nucleus |
| CDY17793 | nucleus |
| CDY19160 | nucleus |
| CDY21951 | nucleus |
| CDY22116 | nucleus |
| CDY22369 | nucleus |
| CDY22987 | nucleus |
| CDY23003 | nucleus |
| CDY23793 | nucleus |
| CDY25649 | nucleus |
| CDY29520 | nucleus |
| CDY29570 | nucleus |
| CDY30517 | nucleus |
| CDY31481 | nucleus |
| CDY33634 | nucleus |
| CDY36574 | nucleus |
| CDY37592 | nucleus |
| CDY38664 | nucleus |
| CDY39984 | nucleus |
| CDY46075 | nucleus |
| CDY48212 | nucleus |
| CDY53304 | nucleus |
| CDY59640 | nucleus |
| CDY61993 | nucleus |
| CDY62475 | nucleus |
| CDY63966 | nucleus |
| CDY65994 | nucleus |
| CDY66415 | nucleus |
| CDY69551 | nucleus |
| CDY71628 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96739 | Canola | cytosol | 95.7 | 96.18 |
| CDY21722 | Canola | cytosol | 93.42 | 94.86 |
| CDX81858 | Canola | cytosol | 92.66 | 94.09 |
| AT1G18040.1 | Thale cress | cytosol | 87.59 | 88.49 |
| CDX73001 | Canola | cytosol | 80.25 | 79.85 |
| CDY60132 | Canola | cytosol | 79.75 | 79.35 |
| KRH41782 | Soybean | cytosol, nucleus | 68.61 | 74.66 |
| KRH39114 | Soybean | nucleus | 75.7 | 72.75 |
| KRH48600 | Soybean | cytosol | 73.42 | 72.32 |
| KRH60482 | Soybean | cytosol | 73.92 | 71.39 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 61.27 | 69.74 |
| PGSC0003DMT400032131 | Potato | cytosol | 72.41 | 68.26 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 72.15 | 68.02 |
| CDY36228 | Canola | cytosol | 58.99 | 67.15 |
| CDX96131 | Canola | cytosol | 58.99 | 67.15 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 70.13 | 65.18 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 69.62 | 64.86 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 69.62 | 64.86 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 69.62 | 64.86 |
| EES18176 | Sorghum | cytosol | 67.59 | 62.38 |
| Zm00001d010476_P001 | Maize | cytosol | 67.59 | 62.38 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 72.15 | 60.38 |
| Zm00001d038109_P002 | Maize | cytosol | 65.57 | 60.23 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 71.39 | 56.29 |
| CDX68497 | Canola | cytosol | 34.94 | 46.94 |
| CDX83047 | Canola | cytosol | 35.19 | 44.55 |
| CDX87018 | Canola | cytosol | 25.82 | 43.04 |
| CDX88294 | Canola | cytosol | 32.41 | 40.89 |
| CDY66197 | Canola | cytosol | 34.94 | 40.83 |
| CDX87588 | Canola | cytosol | 32.15 | 40.58 |
| CDY31856 | Canola | cytosol | 31.9 | 39.87 |
| CDY01345 | Canola | cytosol | 31.9 | 39.87 |
| CDY69065 | Canola | cytosol | 14.94 | 38.82 |
| CDX76164 | Canola | cytosol | 29.87 | 38.82 |
| CDY13189 | Canola | cytosol | 29.87 | 38.82 |
| CDY45733 | Canola | cytosol, plastid, vacuole | 14.94 | 38.82 |
| CDY62439 | Canola | cytosol, nucleus, plasma membrane | 30.38 | 38.71 |
| CDY07716 | Canola | cytosol | 30.13 | 38.51 |
| CDY05870 | Canola | cytosol, plastid | 34.94 | 36.41 |
| CDX87784 | Canola | cytosol | 21.77 | 32.33 |
| CDY60036 | Canola | cytosol | 35.19 | 29.7 |
| CDX81189 | Canola | cytosol, nucleus, plastid | 31.39 | 28.51 |
| CDY38979 | Canola | cytosol | 29.87 | 26.94 |
| CDY67496 | Canola | cytosol | 21.52 | 26.9 |
| CDX76497 | Canola | cytosol | 30.63 | 26.25 |
| CDY09272 | Canola | cytosol | 30.63 | 26.25 |
| CDY01580 | Canola | cytosol | 30.38 | 26.03 |
| CDY39427 | Canola | cytosol | 30.89 | 25.42 |
| CDY13047 | Canola | cytosol | 29.87 | 25.38 |
| CDY49306 | Canola | cytosol | 28.1 | 23.22 |
| CDY37922 | Canola | nucleus | 30.13 | 22.45 |
| CDY56886 | Canola | nucleus | 27.85 | 21.48 |
| CDY23116 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 30.13 | 21.14 |
| CDY01821 | Canola | nucleus | 35.44 | 20.09 |
| CDX96081 | Canola | nucleus | 35.19 | 19.61 |
| CDY26373 | Canola | mitochondrion | 1.27 | 5.62 |
| CDX87783 | Canola | extracellular, mitochondrion | 1.52 | 5.08 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 | Gene3D:3.30.200.20 |
| GO:A0A078D3B9 | EnsemblPlants:CDX83876 | ProteinID:CDX83876 | ProteinID:CDX83876.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00139647001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EDDF54 | : | : |
Description
BnaC08g17690D
Coordinates
chrLK031834:+:933845..936378
Molecular Weight (calculated)
44948.7 Da
IEP (calculated)
10.178
GRAVY (calculated)
-0.420
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPEMEQRK KVADRYLKQE VLGQGTYGVV FKATDTKTGE TVAIKKIRIG KQKEGVNITA LREIKMLKEL KHPHIILLID AFPHKQNLHL VFEFMETDLE
101: GVIRDSNVFF SPADVKSYLL MTLKGLAYCH EKRVLHRDMK PNNLLIGPDG QLKLADFGLA RIFGSPDRKF THQVFARWYR APELLFGAKR YGAAVDVWAA
201: GCVFAELLLR RPFLQGNSDI DQLSKIFTAF GTPKADQWPD MKNLPDYVEY QFVPAPSLPS LFPTVSEDAL DLLSKMFTYD PKARISVTQA LEHRYFTSAP
301: SPTDPSKLPK PIRKQESKAS YGKHEAIKVI SPPRKIRRVM PERGRLDGMK SRVDKDQPAP MSLDFTILAE RPPNRPTITS ADRSHLKRKL DLDFQ
101: GVIRDSNVFF SPADVKSYLL MTLKGLAYCH EKRVLHRDMK PNNLLIGPDG QLKLADFGLA RIFGSPDRKF THQVFARWYR APELLFGAKR YGAAVDVWAA
201: GCVFAELLLR RPFLQGNSDI DQLSKIFTAF GTPKADQWPD MKNLPDYVEY QFVPAPSLPS LFPTVSEDAL DLLSKMFTYD PKARISVTQA LEHRYFTSAP
301: SPTDPSKLPK PIRKQESKAS YGKHEAIKVI SPPRKIRRVM PERGRLDGMK SRVDKDQPAP MSLDFTILAE RPPNRPTITS ADRSHLKRKL DLDFQ
001: MPEQPKKVAD RYLKQEVLGQ GTYGVVFKAT DTKTEQTVAI KKIRLGKQRE GVNITALREI KMLKELKHPH IILLIDAFPH KENLHLVFEF METDLEAVIR
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
101: DSNIFLSPAD IKSYLLMTFK GLAYCHDKWV LHRDMKPNNL LIGVDGQLKL ADFGLARIFG SPNRKFTHQV FARWYRAPEL LFGAKQYGAA VDVWAVACIF
201: AELLLRRPFL QGNSDIDQLS KIFAAFGTPK ADQWPDLTKL PDYVEYQFVP APSLRSLFPA VSDDALDLLS KMFTYDPKAR ISIKQALEHR YFTSAPAPTD
301: PAKLPKPVPK QDGKSSYGKH EAITVQSPPR KLRRVMPERG RVDSLKSHVD KDQQAPMSLD FTILAERPPN RPTITSADRS HLKRKLDLEF Q
Arabidopsis Description
CDKD-3Cyclin-dependent kinase D-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.