Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER91226 | nucleus, nucleus, nucleus |
| EER91497 | nucleus, nucleus |
| EER92677 | nucleus, nucleus, nucleus |
| EER92981 | |
| EER95303 | nucleus |
| EER95545 | nucleus, nucleus |
| EER99015 | nucleus, nucleus |
| EER99528 | nucleus, nucleus, nucleus |
| EES01052 | |
| EES02793 | nucleus |
| EES03772 | nucleus |
| EES06216 | |
| EES07560 | nucleus, nucleus |
| EES11052 | |
| EES11053 | |
| EES11054 | |
| EES12460 | |
| EES12664 | nucleus, nucleus |
| EES13357 | |
| EES13584 | |
| EES16237 | nucleus |
| EES17294 | nucleus, nucleus, nucleus |
| EES18429 | nucleus |
| KXG19603 | nucleus, nucleus |
| KXG20945 | nucleus, nucleus |
| KXG21616 | nucleus |
| KXG22502 | |
| KXG23504 | nucleus, nucleus, nucleus |
| KXG24389 | nucleus |
| KXG25583 | |
| KXG26629 | |
| KXG26630 | |
| KXG29757 | |
| KXG33146 | |
| KXG35258 | |
| KXG40187 | nucleus, nucleus, nucleus, nucleus, nucleus |
| OQU77084 | nucleus, nucleus, nucleus |
| OQU81862 | |
| OQU84321 | |
| OQU85018 | |
| OQU87155 | |
| OQU89443 | nucleus |
| OQU91386 | nucleus |
| OQU92050 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010476_P001 | Maize | cytosol | 98.6 | 98.6 |
| Zm00001d038109_P002 | Maize | cytosol | 94.16 | 93.72 |
| TraesCS1A01G245600.1 | Wheat | cytosol | 83.18 | 83.96 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 83.18 | 83.96 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 82.48 | 83.25 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 82.01 | 82.59 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 62.38 | 76.95 |
| KRH41782 | Soybean | cytosol, nucleus | 64.72 | 76.31 |
| KRH60482 | Soybean | cytosol | 69.16 | 72.37 |
| PGSC0003DMT400032131 | Potato | cytosol | 70.33 | 71.84 |
| VIT_17s0000g02960.t01 | Wine grape | cytosol | 70.79 | 71.8 |
| KRH39114 | Soybean | nucleus | 68.69 | 71.53 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 69.86 | 71.36 |
| KRH48600 | Soybean | cytosol | 66.36 | 70.82 |
| CDX96131 | Canola | cytosol | 57.01 | 70.32 |
| CDY36228 | Canola | cytosol | 57.01 | 70.32 |
| AT1G66750.1 | Thale cress | cytosol | 56.54 | 69.54 |
| CDY21722 | Canola | cytosol | 63.08 | 69.41 |
| CDX81858 | Canola | cytosol | 62.62 | 68.89 |
| AT1G18040.1 | Thale cress | cytosol | 62.85 | 68.8 |
| CDX96739 | Canola | cytosol | 63.08 | 68.7 |
| Bra031013.1-P | Field mustard | cytosol | 60.51 | 68.7 |
| Bra016572.1-P | Field mustard | cytosol | 62.85 | 68.45 |
| CDX83876 | Canola | cytosol | 62.38 | 67.59 |
| AT1G73690.1 | Thale cress | cytosol | 62.85 | 67.59 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 74.3 | 67.37 |
| Bra015974.1-P | Field mustard | cytosol | 61.68 | 66.5 |
| CDX73001 | Canola | cytosol | 61.45 | 66.25 |
| CDY60132 | Canola | cytosol | 60.75 | 65.49 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 73.36 | 62.67 |
| KXG40336 | Sorghum | cytosol | 32.94 | 47.96 |
| EES04403 | Sorghum | cytosol | 31.31 | 45.73 |
| EES15619 | Sorghum | cytosol | 30.37 | 42.21 |
| EER90152 | Sorghum | cytosol, mitochondrion, peroxisome | 30.14 | 39.69 |
| OQU92050 | Sorghum | cytosol | 33.41 | 30.36 |
| OQU80908 | Sorghum | mitochondrion | 29.67 | 30.09 |
| KXG37128 | Sorghum | cytosol | 27.1 | 26.98 |
| EES07406 | Sorghum | cytosol | 28.04 | 26.32 |
| EER87741 | Sorghum | cytosol | 25.93 | 23.47 |
| EES05381 | Sorghum | nucleus | 29.67 | 18.81 |
| EES12419 | Sorghum | nucleus | 30.37 | 18.79 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 | Gene3D:3.30.200.20 |
| EntrezGene:8076855 | UniProt:C5YXJ4 | EnsemblPlants:EES18176 | ProteinID:EES18176 | ProteinID:EES18176.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004693 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007049 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0045944 | GO:GO:0051726 | GO:GO:0070985 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
| PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | EnsemblPlantsGene:SORBI_3009G126600 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0001A88E1A | RefSeq:XP_002439746.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:48038931..48046686
Molecular Weight (calculated)
47753.5 Da
IEP (calculated)
9.409
GRAVY (calculated)
-0.450
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAGNSGSG DDDSGGKLLA DRYQKGEVLG EGTYGVVFKA IDTKTGNTVA VKRIRIGKDK KEGVNFTALR EIKLLKELKD PNIIELIDCF PYKENLHLVF
101: EFMETDLEAL IKDKNIILSP ADTKSYVQMM LKGLAFCHKK WVLHRDMKPN NLLIGADGQL KLADFGLARM FGSPGRNFTH QVFARWYRAP ELLFGSKQYG
201: SGVDIWAAGC IFAELLTRRA FLQGSSDIDQ LGKIFAALGT PKSSQWPDMA YLPDYVEYQY VAAPPLRTLF PMASDDALDL LSKMLTYDPK ARISAQQALE
301: HRYFSSLPAP TRPSQLPRPR RKGDQGNNKI PDLNLQDGPV VLSPPRKFRR VTAHEGMEGM HRADKVDEHP SGMRHTDDMP SQSSRIPMSV DVGAVFGTRP
401: APRPTLNSAD KSRLKRKLDM DPEFGYAE
101: EFMETDLEAL IKDKNIILSP ADTKSYVQMM LKGLAFCHKK WVLHRDMKPN NLLIGADGQL KLADFGLARM FGSPGRNFTH QVFARWYRAP ELLFGSKQYG
201: SGVDIWAAGC IFAELLTRRA FLQGSSDIDQ LGKIFAALGT PKSSQWPDMA YLPDYVEYQY VAAPPLRTLF PMASDDALDL LSKMLTYDPK ARISAQQALE
301: HRYFSSLPAP TRPSQLPRPR RKGDQGNNKI PDLNLQDGPV VLSPPRKFRR VTAHEGMEGM HRADKVDEHP SGMRHTDDMP SQSSRIPMSV DVGAVFGTRP
401: APRPTLNSAD KSRLKRKLDM DPEFGYAE
001: MEQPKKVADR YLKREVLGQG TYGVVFKATD TKNGETVAIK KIRLGKEKEG VNVTALREIK LLKELKHPHI IELIDAFPHK ENLHIVFEFM ETDLEAVIRD
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
Arabidopsis Description
CDKD-1Cyclin-dependent kinase D-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.