CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91497	nucleus
EER92984
EER93090
EER95545	nucleus
EES00066
EES01589
EES07560	nucleus
EES11769
EES12524
EES17034
EES17571
KXG19603	nucleus
KXG30252
KXG38386
OQU90254

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67580.1	EER93090	AT1G09760.1	20706207
AT1G67580.1	EES01589	AT1G61870.1	20706207
AT1G67580.1	EES00066	AT2G18740.1	20706207
AT1G67580.1	KXG30252	AT2G26430.1	20706207
AT1G67580.1	EER91497	AT2G32710.1	20407024
AT1G67580.1	EER95545	AT2G32710.1	20407024
AT1G67580.1	KXG38386	AT2G33340.1	20706207
AT1G67580.1	EER92984	AT2G46610.1	20706207
AT1G67580.1	EES11769	AT2G46610.1	20706207
AT1G67580.1	EES12524	AT2G47640.1	20706207
AT1G67580.1	EES17571	AT2G47640.1	20706207
AT1G67580.1	EES17034	AT3G04620.1	20706207
AT1G67580.1	OQU90254	AT3G16980.1	20706207
AT1G67580.1	EES12524	AT3G62840.1	20706207
AT1G67580.1	EES17571	AT3G62840.1	20706207
AT1G67580.1	EES07560	AT5G10440.1	20407024
AT1G67580.1	KXG19603	AT5G10440.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017128_P002	Maize	nucleus	87.26	88.7
Os02t0602100-02	Rice	nucleus	69.93	68.11
TraesCS6B01G244100.1	Wheat	nucleus	66.96	67.56
TraesCS6A01G214100.1	Wheat	nucleus	67.56	67.56
TraesCS6D01G196700.1	Wheat	nucleus	67.11	67.11
HORVU6Hr1G054600.5	Barley	nucleus	65.48	65.1
EES12419	Sorghum	nucleus	64.44	62.86
GSMUA_Achr8P01120_001	Banana	nucleus	51.11	59.69
GSMUA_Achr5P25400_001	Banana	nucleus	56.59	54.73
GSMUA_Achr8P08900_001	Banana	nucleus	52.15	54.24
GSMUA_Achr11P...	Banana	nucleus	55.85	54.01
KRH42643	Soybean	nucleus	57.93	52.48
KRH58745	Soybean	nucleus	57.63	52.14
VIT_01s0010g02550.t01	Wine grape	nucleus	57.63	51.59
CDY01821	Canola	nucleus	53.19	51.51
Bra004236.1-P	Field mustard	nucleus	53.19	50.63
CDX96081	Canola	nucleus	53.19	50.63
KRH31446	Soybean	nucleus	54.67	49.73
AT1G67580.1	Thale cress	nucleus	53.78	48.27
PGSC0003DMT400044987	Potato	nucleus	56.44	47.8
Solyc05g014760.2.1	Tomato	nucleus	56.44	47.1
PGSC0003DMT400034649	Potato	nucleus	56.74	46.65
EES04403	Sorghum	cytosol	20.15	46.42
KRG97452	Soybean	nucleus	42.96	46.33
KXG40336	Sorghum	cytosol	19.56	44.9
EES15619	Sorghum	cytosol	18.81	41.23
EER90152	Sorghum	cytosol, mitochondrion, peroxisome	19.7	40.92
OQU80908	Sorghum	mitochondrion	20.44	32.7
OQU92050	Sorghum	cytosol	21.33	30.57
EES18176	Sorghum	cytosol	18.81	29.67
KXG37128	Sorghum	cytosol	18.67	29.3
EES07406	Sorghum	cytosol	18.07	26.75
EER87741	Sorghum	cytosol	17.93	25.58

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.7	MapMan:18.4.3.1.7	Gene3D:3.30.200.20	EntrezGene:8059683	EntrezGene:8072422
UniProt:C5XXM7	EnsemblPlants:EES05381	ProteinID:EES05381	ProteinID:EES05381.1	ProteinID:EES05419.2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468
GO:GO:0007049	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010468
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF332	InterPro:Prot_kinase_dom	SMART:SM00220
EnsemblPlantsGene:SORBI_3004G205800	SUPFAM:SSF56112	unigene:Sbi.14364	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8525A	RefSeq:XP_002452405.1
RefSeq:XP_002452443.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:55683681..55687865

Molecular Weight (calculated)

76402.2 Da

IEP (calculated)

7.391

GRAVY (calculated)

-0.860

Length

675 amino acids

Sequence
(BLAST)

001: MAAARHGGYR SHDVSRRREH DLERSRRSKE YRRPSRDRDS ERRRDGSRGR EVDNGYSRPR SPYPPPRSRP SRRKDDKEPG EVSSDSGSES AGRPPVPRQD
101: GVLGVRRDGD GGSLPPSKKR KHSPGFHDTN VSKLKARDEE WSRRGPDALA AELPLHSPPP LSDTTPEAVN LEVLVVPNDA ERRDGITEEE EDCATRNIFT
201: SRWADADEEE EEVIVPKKKK KSVSPAHLPE EKSTKKVMSP ELGAVMDSKT SRRTSSSSSN SMGSENCNIE VDEGNCMDVE KEDDIDSSAG CSPGTRSRSD
301: VHRSGTPEAV RPPRRCFNML QGCRSIDEFE RINTINEGTY GVVFRVRDKK TGEIVALKKV KVDKEKGREG FPLTSLREIN ILLSFDHPSI VDVKEVVVGG
401: HDDDTFMVME YMEHDLKGVM EAMKQPYTQS EVKCLMLQLL EGVKYLHDNW VLHRDLKTSN LLLNNRGELK ICDFGLSRQY GSLLKPYTQP VVTLWYRAPE
501: LLLGAKEYST AIDMWSLGCI MAELLSKEPL FTGKSEIDQL DKIFRILGTP NEERWHGFSK LPGAKGNFVK RPYNRLRDKF PAVSFTGGLT LSEAGFDLLN
601: RLLTYDPEKR ISADDALDHD WFREVPLPKT KEFMPTFPAL NEQDRRVKKY MKSPDPLVEQ QMKEQGSIGD RGLFG

Best Arabidopsis Sequence Match ( AT1G67580.2 )
(BLAST)

001: MAAGRNIRYP DHELRDQESN SRFSRRDSAY ANEDYNHVRN GAIDNGKGRV SNLRHGDRDR IKSGARQEEN KMVSSGFRLS KSNPGSREVF IDLGPKRCGF
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAG1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.