Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G196700.1 | Wheat | nucleus | 97.46 | 96.59 |
TraesCS6A01G214100.1 | Wheat | nucleus | 96.41 | 95.56 |
HORVU6Hr1G054600.5 | Barley | nucleus | 92.38 | 91.02 |
Os02t0602100-02 | Rice | nucleus | 72.5 | 69.99 |
EES05381 | Sorghum | nucleus | 67.56 | 66.96 |
Zm00001d017128_P002 | Maize | nucleus | 66.07 | 66.57 |
GSMUA_Achr8P01120_001 | Banana | nucleus | 51.72 | 59.86 |
TraesCS2B01G364800.5 | Wheat | nucleus | 64.13 | 58.37 |
GSMUA_Achr8P08900_001 | Banana | nucleus | 53.81 | 55.47 |
GSMUA_Achr11P... | Banana | nucleus | 56.5 | 54.15 |
GSMUA_Achr5P25400_001 | Banana | nucleus | 56.5 | 54.15 |
VIT_01s0010g02550.t01 | Wine grape | nucleus | 58.89 | 52.25 |
CDY01821 | Canola | nucleus | 53.36 | 51.22 |
KRH42643 | Soybean | nucleus | 56.95 | 51.14 |
KRH58745 | Soybean | nucleus | 56.95 | 51.07 |
Bra004236.1-P | Field mustard | nucleus | 53.66 | 50.63 |
CDX96081 | Canola | nucleus | 53.66 | 50.63 |
KRH31446 | Soybean | nucleus | 54.41 | 49.06 |
AT1G67580.1 | Thale cress | nucleus | 54.26 | 48.27 |
PGSC0003DMT400044987 | Potato | nucleus | 56.2 | 47.18 |
KRG97452 | Soybean | nucleus | 43.95 | 46.96 |
Solyc05g014760.2.1 | Tomato | nucleus | 55.75 | 46.11 |
TraesCS6B01G105100.1 | Wheat | cytosol | 20.18 | 46.08 |
PGSC0003DMT400034649 | Potato | nucleus | 55.61 | 45.31 |
TraesCS4B01G353600.1 | Wheat | cytosol | 19.88 | 45.24 |
TraesCS5B01G144100.2 | Wheat | cytosol | 18.39 | 40.46 |
TraesCS4B01G123100.1 | Wheat | cytosol | 18.54 | 40.13 |
TraesCS7B01G142600.1 | Wheat | cytosol | 19.43 | 39.88 |
TraesCS1B01G212800.1 | Wheat | cytosol | 22.42 | 31.91 |
TraesCS1B01G256600.1 | Wheat | cytosol | 19.28 | 30.42 |
TraesCS5B01G536500.1 | Wheat | cytosol | 17.94 | 27.09 |
TraesCS6B01G296700.2 | Wheat | cytosol | 17.19 | 25.0 |
Protein Annotations
Gene3D:1.10.510.10 | MapMan:13.1.1.2.7 | MapMan:18.4.3.1.7 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 |
PANTHER:PTHR24056:SF332 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS6B01G244100 |
EnsemblPlants:TraesCS6B01G244100.1 | TIGR:cd07843 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:+:435304902..435307859
Molecular Weight (calculated)
75322.1 Da
IEP (calculated)
7.466
GRAVY (calculated)
-0.788
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGRHGGYS GYEASKEREF DLEASRRGKD YHHRNPSRHR DSDRRRDGGR SRDREPSNGH TRHRSPHLPP KSRPSGRREE REPGEVSSGS GSEGSRGRPL
101: KAREPGVNGV VGVSREGGVP SPSKKRKYSL VILDRNASKP RVQDVGNPSM KEVGTVVANP SSIDFDASVD VQNVERLQEH DNDRVIMEKD EEDAYPTMIN
201: IRTSRWADAD DEEEIVSKKK KSVSPEQGSV KKVTSPELGK LMVDKDSNSS VSSDSGVVQF SANRDLEVDK GDYMDIEKDA GDDSSALCGM HTDSESHRCS
301: SRTPEPAGSP HRCINMLQGC RGVDEFERLN TINEGTYGIV SRAKDKKTGE IVALKKVKME NEREGFPLTS LREINILLSF HHPSIVDVKE IVVGSGDSTY
401: MVMEYMEHDL KAVMETMKQP YSQSEVKCLM LQLLEGVKYL HDNWVIHRDL KTSNILLNNR GELKICDFGL SRQYGSPLKP YTQLVVTLWY RAPELLLGAK
501: KYSTAIDMWS LGCIMAELLS KKPLFDGKRD IDQLSKIFRM LGTPNEDIWP GCSKLPGAKA KFAKQPYNRL REKFPAVSFT GGLTLSEAGF DLLNRMLTYD
601: PETRISAEDA LNHEWFCEVP LPQSRDSMPT FHSLNEQDRR MMKRMKSPDP LEEQRMKELG SIHDRGIFS
101: KAREPGVNGV VGVSREGGVP SPSKKRKYSL VILDRNASKP RVQDVGNPSM KEVGTVVANP SSIDFDASVD VQNVERLQEH DNDRVIMEKD EEDAYPTMIN
201: IRTSRWADAD DEEEIVSKKK KSVSPEQGSV KKVTSPELGK LMVDKDSNSS VSSDSGVVQF SANRDLEVDK GDYMDIEKDA GDDSSALCGM HTDSESHRCS
301: SRTPEPAGSP HRCINMLQGC RGVDEFERLN TINEGTYGIV SRAKDKKTGE IVALKKVKME NEREGFPLTS LREINILLSF HHPSIVDVKE IVVGSGDSTY
401: MVMEYMEHDL KAVMETMKQP YSQSEVKCLM LQLLEGVKYL HDNWVIHRDL KTSNILLNNR GELKICDFGL SRQYGSPLKP YTQLVVTLWY RAPELLLGAK
501: KYSTAIDMWS LGCIMAELLS KKPLFDGKRD IDQLSKIFRM LGTPNEDIWP GCSKLPGAKA KFAKQPYNRL REKFPAVSFT GGLTLSEAGF DLLNRMLTYD
601: PETRISAEDA LNHEWFCEVP LPQSRDSMPT FHSLNEQDRR MMKRMKSPDP LEEQRMKELG SIHDRGIFS
001: MAAGRNIRYP DHELRDQESN SRFSRRDSAY ANEDYNHVRN GAIDNGKGRV SNLRHGDRDR IKSGARQEEN KMVSSGFRLS KSNPGSREVF IDLGPKRCGF
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG
101: SARSVDREPG ELSSESGSDD LIESESLAKV NGVVKEVENR AQSPVEKKRK FSPIVWDRDD HERSNLSRNE KPVEVTPLPP PPPLVKRSSQ SPSVSCGGNS
201: HYSPAKSDMH QDPVEVGVSA VSMPALSPSV EMSSLCVVEQ SSNAEQDDKQ EHATHLEEDE NMPTRHISSS RWAAGNSSPT DEVEIVEEVG EKKRRKKPFP
301: VQGRFRNTSQ TPEVGELVRE GYRSSDSDER GHHSLPGSRD DFEERDAVKS DKMEIDEEEH RRENSVDSLS ETDSDDEYVR HETPEPASTP LRSINMLQGC
401: RSVDEFERLN KIDEGTYGVV YRAKDKKTGE IVALKKVKME KEREGFPLTS LREINILLSF HHPSIVDVKE VVVGSSLDSI FMVMEYMEHD LKALMETMKQ
501: RFSQSEVKCL MLQLLEGVKY LHDNWVLHRD LKTSNLLLNN RGELKICDFG LARQYGSPLK PYTHLVVTLW YRAPELLLGA KQYSTAIDMW SLGCIMAELL
601: MKAPLFNGKT EFDQLDKIFR ILGTPNESIW PGFSKLPGVK VNFVKHQYNL LRKKFPATSF TGAPVLSDAG FDLLNKLLTY DPERRITVNE ALKHDWFREV
701: PLPKSKDFMP TFPAQHAQDR RGRRMVKSPD PLEEQRRKEL TQTELGSGGL FG
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.