Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G196700.1 | Wheat | nucleus | 92.34 | 92.89 |
| TraesCS6A01G214100.1 | Wheat | nucleus | 92.34 | 92.89 |
| TraesCS6B01G244100.1 | Wheat | nucleus | 91.02 | 92.38 |
| Os02t0602100-02 | Rice | nucleus | 70.54 | 69.12 |
| EES05381 | Sorghum | nucleus | 65.1 | 65.48 |
| Zm00001d017128_P002 | Maize | nucleus | 63.33 | 64.76 |
| GSMUA_Achr8P01120_001 | Banana | nucleus | 50.37 | 59.17 |
| HORVU2Hr1G084400.1 | Barley | nucleus | 61.86 | 55.78 |
| GSMUA_Achr8P08900_001 | Banana | nucleus | 52.72 | 55.16 |
| GSMUA_Achr5P25400_001 | Banana | nucleus | 55.52 | 54.01 |
| GSMUA_Achr11P... | Banana | nucleus | 55.23 | 53.72 |
| VIT_01s0010g02550.t01 | Wine grape | nucleus | 57.58 | 51.86 |
| CDY01821 | Canola | nucleus | 52.14 | 50.79 |
| Bra004236.1-P | Field mustard | nucleus | 52.43 | 50.21 |
| CDX96081 | Canola | nucleus | 52.43 | 50.21 |
| KRH42643 | Soybean | nucleus | 55.08 | 50.2 |
| KRH58745 | Soybean | nucleus | 55.08 | 50.13 |
| KRH31446 | Soybean | nucleus | 53.17 | 48.65 |
| AT1G67580.1 | Thale cress | nucleus | 53.31 | 48.14 |
| KRG97452 | Soybean | nucleus | 43.3 | 46.96 |
| PGSC0003DMT400044987 | Potato | nucleus | 54.79 | 46.67 |
| Solyc05g014760.2.1 | Tomato | nucleus | 54.34 | 45.61 |
| PGSC0003DMT400034649 | Potato | nucleus | 54.2 | 44.82 |
| HORVU4Hr1G085830.4 | Barley | cytosol | 19.73 | 39.3 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 20.03 | 36.76 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 17.82 | 36.23 |
| HORVU5Hr1G046190.1 | Barley | plastid | 18.56 | 33.78 |
| HORVU4Hr1G023490.7 | Barley | endoplasmic reticulum, vacuole | 18.7 | 33.51 |
| HORVU1Hr1G051380.3 | Barley | cytosol | 22.09 | 31.91 |
| HORVU1Hr1G062980.2 | Barley | cytosol | 19.15 | 30.59 |
| HORVU5Hr1G120960.2 | Barley | cytosol | 17.53 | 26.98 |
| HORVU6Hr1G068270.1 | Barley | cytosol | 16.64 | 24.51 |
| HORVU0Hr1G016660.4 | Barley | cytosol | 16.64 | 24.51 |
| HORVU7Hr1G008690.3 | Barley | endoplasmic reticulum, plasma membrane | 16.49 | 22.4 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.7 | MapMan:18.4.3.1.7 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU6Hr1G054600 | EnsemblPlants:HORVU6Hr1G054600.5 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M0XSY0 | PFAM:PF00069 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF332 | InterPro:Prot_kinase_dom | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0002969D88 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr6H:+:345638911..345642122
Molecular Weight (calculated)
76406.3 Da
IEP (calculated)
6.528
GRAVY (calculated)
-0.758
Length
679 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGRRGGYS GYEVSREREF DLEASKRGKD RHLRNPSRHR DSDYRRDGGR SRDREPSNGY TRHRSPHLPP KSRPSGRREE REPGEVSSGS GSEDSRGHPL
101: KAREPGVNGA VGVSREGGVP SPSKKRKYWP VNLDRNGSKP RVQDVASSME EVGAVVANLL DVGNLSSIDL DASVDVQNVE RLQERNNGRV RVIMEEDEEE
201: DTYQTMINIM SSRWADADDE KEIVSKKKKS LSPEQGFLKK ATSPELGKLM VDKDSGGNSS VSSDSGLVQF SANRDLEVDK GDYMDIEKDA EDDSSALCVL
301: RTDSESQGCS SRTPEPAGSP HRCINMLQGC RGVDEFERLN TINEGTYGIV SRAKDKKTGE IVALKKVKME NEREGFPLTS LREINILLSF HHPSIVDVKE
401: IVVGSGDSTY MVMEYMEHDL KAVTETMKQP YSQSEVKCLM LQLLEGVKYL HDNWVIHRDL KTSNILLNNC GELKICDFGL SRQYGSPLKP YTQLVVTLWY
501: RAPELLLGAK EYSTAIDMWS LGCIMAELLS KKPLFDGKRD IDQLSKIFRM LGTPNEDIWP GYSKLPGARA KFAKQPYNKL REKFPAVSFT GGLTLSEAGF
601: DLLNRMLTYD PETRISAEDA LNHEWFCEAP LPQSRDSMPT FHSLNEQDRR MMKRMKSPDP MEEQRMKELG SIHDRGIFG
101: KAREPGVNGA VGVSREGGVP SPSKKRKYWP VNLDRNGSKP RVQDVASSME EVGAVVANLL DVGNLSSIDL DASVDVQNVE RLQERNNGRV RVIMEEDEEE
201: DTYQTMINIM SSRWADADDE KEIVSKKKKS LSPEQGFLKK ATSPELGKLM VDKDSGGNSS VSSDSGLVQF SANRDLEVDK GDYMDIEKDA EDDSSALCVL
301: RTDSESQGCS SRTPEPAGSP HRCINMLQGC RGVDEFERLN TINEGTYGIV SRAKDKKTGE IVALKKVKME NEREGFPLTS LREINILLSF HHPSIVDVKE
401: IVVGSGDSTY MVMEYMEHDL KAVTETMKQP YSQSEVKCLM LQLLEGVKYL HDNWVIHRDL KTSNILLNNC GELKICDFGL SRQYGSPLKP YTQLVVTLWY
501: RAPELLLGAK EYSTAIDMWS LGCIMAELLS KKPLFDGKRD IDQLSKIFRM LGTPNEDIWP GYSKLPGARA KFAKQPYNKL REKFPAVSFT GGLTLSEAGF
601: DLLNRMLTYD PETRISAEDA LNHEWFCEAP LPQSRDSMPT FHSLNEQDRR MMKRMKSPDP MEEQRMKELG SIHDRGIFG
001: MAAGGVDVSR SSVAVKKDYD FYRNGSRDVY VRQSGRDDER RQIKRPSDHD LRRNDGRHRS RLAYEKGELR EEAEVQRPSE KRRKFSPIVW NAEKVGRAPS
101: REKTKSPFPV PTTTVISNQA VAGKTTSNDQ VNALMSPEPS YLAPVQPSEA LLAVKHPVDD LEEGQLEEEQ VMQEDVKEGL LEEEQVMQEP NIKTSRWGTG
201: LTSPKEELIS VNVSKTNRWN RSSLTPECEE VMVSEEQQCY SSGSGSGHLS VEKLSADGNS GREYYSSDHD ELEHEDQDSL TPGEMNMMFG SRSVNEFQKL
301: NKINEGTYGI VYKARDEKTK EIVALKKIKM KEDRFEEEYG FPLTSLREIN ILLSCNHPAI VNVKEVVVGG KNDNDVYMVM EHLEHDLRGV MDRRKEPFST
401: SEVKCLMMQL LDGLKYLHTN WIIHRDLKPS NLLMNNCGEL KICDFGMARQ YGSPIKPYTQ MVITQWYRPP ELLLGAKEYS TAVDMWSVGC IMAELLSQKP
501: LFPGKSELDQ LQKIFAVLGT PNEAIWPGFS SFPNAKAKFP TQPYNMLRKK FPAISFVGGQ ILSERGFDLL NSLLTLDPEK RLTVEDALNH GWFHEVPLPK
601: SKDFMPTYPP KR
101: REKTKSPFPV PTTTVISNQA VAGKTTSNDQ VNALMSPEPS YLAPVQPSEA LLAVKHPVDD LEEGQLEEEQ VMQEDVKEGL LEEEQVMQEP NIKTSRWGTG
201: LTSPKEELIS VNVSKTNRWN RSSLTPECEE VMVSEEQQCY SSGSGSGHLS VEKLSADGNS GREYYSSDHD ELEHEDQDSL TPGEMNMMFG SRSVNEFQKL
301: NKINEGTYGI VYKARDEKTK EIVALKKIKM KEDRFEEEYG FPLTSLREIN ILLSCNHPAI VNVKEVVVGG KNDNDVYMVM EHLEHDLRGV MDRRKEPFST
401: SEVKCLMMQL LDGLKYLHTN WIIHRDLKPS NLLMNNCGEL KICDFGMARQ YGSPIKPYTQ MVITQWYRPP ELLLGAKEYS TAVDMWSVGC IMAELLSQKP
501: LFPGKSELDQ LQKIFAVLGT PNEAIWPGFS SFPNAKAKFP TQPYNMLRKK FPAISFVGGQ ILSERGFDLL NSLLTLDPEK RLTVEDALNH GWFHEVPLPK
601: SKDFMPTYPP KR
Arabidopsis Description
CDKG1Cyclin-dependent kinase G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.