Factsheet for HORVU6Hr1G056640.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033021_P001	Maize	cytosol	87.06	40.44
Zm00001d019681_P002	Maize	nucleus	81.18	32.39
PGSC0003DMT400009464	Potato	cytosol	56.47	19.92
TraesCS6B01G362300.1	Wheat	nucleus	90.59	18.78
TraesCS6A01G331500.1	Wheat	nucleus	90.59	18.69
KXG30252	Sorghum	nucleus	70.59	18.58
TraesCS6D01G310800.2	Wheat	nucleus	89.41	18.54
HORVU6Hr1G080430.3	Barley	nucleus	90.59	17.26
Os01t0377500-01	Rice	nucleus	83.53	16.63
Solyc01g098350.2.1	Tomato	nucleus	71.76	14.32
GSMUA_Achr8P06830_001	Banana	nucleus	74.12	14.16
Bra012508.1-P	Field mustard	nucleus	67.06	13.8
CDY51595	Canola	nucleus	67.06	13.8
CDY03883	Canola	nucleus	67.06	13.67
PGSC0003DMT400057824	Potato	nucleus	71.76	13.62
AT2G26430.1	Thale cress	cytosol	64.71	13.22
KRG92800	Soybean	nucleus	68.24	13.09
KRH33999	Soybean	nucleus	68.24	12.95
VIT_12s0028g00110.t01	Wine grape	nucleus	69.41	10.83
HORVU6Hr1G083890.3	Barley	plastid	27.06	7.59
HORVU4Hr1G021220.13	Barley	cytosol	30.59	5.91
HORVU4Hr1G021250.6	Barley	nucleus	31.76	5.64
HORVU2Hr1G083340.2	Barley	nucleus	30.59	5.35
HORVU3Hr1G059980.2	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	23.53	5.21
HORVU5Hr1G038970.16	Barley	nucleus	32.94	5.14
HORVU0Hr1G007890.2	Barley	cytosol, nucleus	16.47	3.67
CDY27590	Canola	cytosol	25.88	3.54
Bra032800.1-P	Field mustard	cytosol	25.88	3.54
HORVU6Hr1G017740.2	Barley	nucleus	30.59	2.86
Zm00001d033023_P001	Maize	cytosol	2.35	0.81
CDX84949	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G056640.2	EnsemblPlantsGene:HORVU6Hr1G056640	Gene3D:1.10.472.10	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_N
PANTHER:PTHR10026	PANTHER:PTHR10026:SF100	PFAM:PF00134	SUPFAM:SSF47954	UniParc:UPI000B471011	UniProt:A0A287U9A6
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:365561442..365562258

Molecular Weight (calculated)

9964.3 Da

IEP (calculated)

10.667

GRAVY (calculated)

0.011

Length

85 amino acids

Sequence
(BLAST)

1: MCVVNSLIQQ RPQAVMATAQ VLFHRFYCKK SFARFSAKRV AASCVWLAGK LEESPRRSKH IIFVFHRMEC RRENLPIEFL DVFST

Best Arabidopsis Sequence Match ( AT2G26430.4 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKVRICCRE QARLLILNVL QDQLITT

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.